Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 MIR1909-201ENST00000411312 80 ntBASIC17.42■□□□□ 0.38
RIF1Q5UIP0 ACA64.2-201ENST00000459014 129 ntBASIC17.42■□□□□ 0.38
RIF1Q5UIP0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 AC116407.2-201ENST00000613639 860 ntBASIC17.41■□□□□ 0.38
RIF1Q5UIP0 IRX1P1-201ENST00000438849 1838 ntBASIC17.41■□□□□ 0.38
RIF1Q5UIP0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 AC020907.5-201ENST00000624372 1936 ntBASIC17.41■□□□□ 0.38
RIF1Q5UIP0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 TIMM8BP1-201ENST00000452384 211 ntBASIC17.41■□□□□ 0.38
RIF1Q5UIP0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 AC008667.4-201ENST00000607370 168 ntBASIC17.41■□□□□ 0.38
RIF1Q5UIP0 AC004790.2-201ENST00000623588 572 ntBASIC17.41■□□□□ 0.38
RIF1Q5UIP0 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RIF1Q5UIP0 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.4■□□□□ 0.38
RIF1Q5UIP0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 AC023141.13-201ENST00000604991 943 ntBASIC17.4■□□□□ 0.38
RIF1Q5UIP0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 AC003669.1-201ENST00000334569 611 ntBASIC17.4■□□□□ 0.38
RIF1Q5UIP0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 MIR943-201ENST00000401286 94 ntBASIC17.4■□□□□ 0.38
RIF1Q5UIP0 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 FAM58DP-201ENST00000428076 619 ntBASIC17.4■□□□□ 0.38
RIF1Q5UIP0 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.4■□□□□ 0.38
RIF1Q5UIP0 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
RIF1Q5UIP0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RIF1Q5UIP0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
RIF1Q5UIP0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RIF1Q5UIP0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RIF1Q5UIP0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RIF1Q5UIP0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RIF1Q5UIP0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.39■□□□□ 0.37
RIF1Q5UIP0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.39■□□□□ 0.37
RIF1Q5UIP0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RIF1Q5UIP0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RIF1Q5UIP0 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.39■□□□□ 0.37
RIF1Q5UIP0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.39■□□□□ 0.37
RIF1Q5UIP0 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.39■□□□□ 0.37
RIF1Q5UIP0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.39■□□□□ 0.37
RIF1Q5UIP0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.39■□□□□ 0.37
RIF1Q5UIP0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.39■□□□□ 0.37
RIF1Q5UIP0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RIF1Q5UIP0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RIF1Q5UIP0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RIF1Q5UIP0 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RIF1Q5UIP0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RIF1Q5UIP0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.39■□□□□ 0.37
RIF1Q5UIP0 LINC01126-201ENST00000623515 1646 ntBASIC17.39■□□□□ 0.37
RIF1Q5UIP0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.39■□□□□ 0.37
RIF1Q5UIP0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms