Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO1Q2MKA7 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.64■□□□□ 0.09
RSPO1Q2MKA7 KRT18P65-201ENST00000439811 1286 ntBASIC15.64■□□□□ 0.09
RSPO1Q2MKA7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.64■□□□□ 0.09
RSPO1Q2MKA7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.64■□□□□ 0.09
RSPO1Q2MKA7 VENTXP5-201ENST00000523979 775 ntBASIC15.64■□□□□ 0.09
RSPO1Q2MKA7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.64■□□□□ 0.09
RSPO1Q2MKA7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.64■□□□□ 0.09
RSPO1Q2MKA7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.64■□□□□ 0.09
RSPO1Q2MKA7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO1Q2MKA7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO1Q2MKA7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO1Q2MKA7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
RSPO1Q2MKA7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO1Q2MKA7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.64■□□□□ 0.09
RSPO1Q2MKA7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.64■□□□□ 0.09
RSPO1Q2MKA7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RSPO1Q2MKA7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 AC022898.2-201ENST00000616822 1312 ntBASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RSPO1Q2MKA7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 LINC01311-201ENST00000565162 1445 ntBASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 TMPOP1-202ENST00000424642 1267 ntBASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 AP003733.1-201ENST00000491725 852 ntBASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 AC022616.7-201ENST00000525383 220 ntBASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 RNF126P1-202ENST00000569893 925 ntBASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 AC083849.1-201ENST00000615227 514 ntBASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RSPO1Q2MKA7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.61■□□□□ 0.09
RSPO1Q2MKA7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO1Q2MKA7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.61■□□□□ 0.09
RSPO1Q2MKA7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
RSPO1Q2MKA7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO1Q2MKA7 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.61■□□□□ 0.09
RSPO1Q2MKA7 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.61■□□□□ 0.09
RSPO1Q2MKA7 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO1Q2MKA7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
RSPO1Q2MKA7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms