Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC31.53■■■□□ 2.64
HMGXB3Q12766 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
HMGXB3Q12766 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC31.53■■■□□ 2.64
HMGXB3Q12766 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC31.53■■■□□ 2.64
HMGXB3Q12766 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
HMGXB3Q12766 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
HMGXB3Q12766 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
HMGXB3Q12766 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC31.52■■■□□ 2.64
HMGXB3Q12766 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
HMGXB3Q12766 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
HMGXB3Q12766 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
HMGXB3Q12766 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
HMGXB3Q12766 AC074386.1-202ENST00000463561 864 ntBASIC31.52■■■□□ 2.64
HMGXB3Q12766 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC31.52■■■□□ 2.64
HMGXB3Q12766 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC31.52■■■□□ 2.64
HMGXB3Q12766 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC31.52■■■□□ 2.64
HMGXB3Q12766 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
HMGXB3Q12766 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
HMGXB3Q12766 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC31.51■■■□□ 2.64
HMGXB3Q12766 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
HMGXB3Q12766 AL161938.1-201ENST00000569833 2180 ntBASIC31.51■■■□□ 2.64
HMGXB3Q12766 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
HMGXB3Q12766 BAD-202ENST00000394531 631 ntTSL 3 BASIC31.51■■■□□ 2.63
HMGXB3Q12766 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC31.51■■■□□ 2.63
HMGXB3Q12766 PON3-205ENST00000451904 1053 ntTSL 3 BASIC31.51■■■□□ 2.63
HMGXB3Q12766 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC31.51■■■□□ 2.63
HMGXB3Q12766 AC019129.2-201ENST00000609837 1235 ntBASIC31.51■■■□□ 2.63
HMGXB3Q12766 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
HMGXB3Q12766 FUT8-AS1-201ENST00000621019 1521 ntBASIC31.51■■■□□ 2.63
HMGXB3Q12766 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
HMGXB3Q12766 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
HMGXB3Q12766 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC31.51■■■□□ 2.63
HMGXB3Q12766 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC31.51■■■□□ 2.63
HMGXB3Q12766 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
HMGXB3Q12766 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
HMGXB3Q12766 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
HMGXB3Q12766 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
HMGXB3Q12766 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
HMGXB3Q12766 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
HMGXB3Q12766 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC31.5■■■□□ 2.63
HMGXB3Q12766 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
HMGXB3Q12766 AC093520.2-201ENST00000561830 333 ntBASIC31.5■■■□□ 2.63
HMGXB3Q12766 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC31.5■■■□□ 2.63
HMGXB3Q12766 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC31.5■■■□□ 2.63
HMGXB3Q12766 AL121761.2-201ENST00000598007 1648 ntBASIC31.5■■■□□ 2.63
HMGXB3Q12766 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC31.5■■■□□ 2.63
HMGXB3Q12766 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC31.5■■■□□ 2.63
HMGXB3Q12766 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC31.5■■■□□ 2.63
HMGXB3Q12766 AL049757.1-201ENST00000616842 1596 ntBASIC31.5■■■□□ 2.63
HMGXB3Q12766 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC31.5■■■□□ 2.63
HMGXB3Q12766 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
HMGXB3Q12766 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
HMGXB3Q12766 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC31.49■■■□□ 2.63
HMGXB3Q12766 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC31.49■■■□□ 2.63
HMGXB3Q12766 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC31.49■■■□□ 2.63
HMGXB3Q12766 AL353135.1-201ENST00000606729 504 ntBASIC31.49■■■□□ 2.63
HMGXB3Q12766 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC31.49■■■□□ 2.63
HMGXB3Q12766 LINC00628-201ENST00000628516 1289 ntBASIC31.49■■■□□ 2.63
HMGXB3Q12766 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC31.49■■■□□ 2.63
HMGXB3Q12766 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC31.49■■■□□ 2.63
HMGXB3Q12766 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
HMGXB3Q12766 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC31.49■■■□□ 2.63
HMGXB3Q12766 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
HMGXB3Q12766 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
HMGXB3Q12766 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
HMGXB3Q12766 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC31.49■■■□□ 2.63
HMGXB3Q12766 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
HMGXB3Q12766 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
HMGXB3Q12766 MIR661-201ENST00000384842 89 ntBASIC31.49■■■□□ 2.63
HMGXB3Q12766 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC31.49■■■□□ 2.63
HMGXB3Q12766 AC069262.1-201ENST00000539058 672 ntBASIC31.49■■■□□ 2.63
HMGXB3Q12766 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC31.49■■■□□ 2.63
HMGXB3Q12766 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
HMGXB3Q12766 IGHV3OR16-6-201ENST00000568775 360 ntBASIC31.49■■■□□ 2.63
HMGXB3Q12766 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
HMGXB3Q12766 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC31.49■■■□□ 2.63
HMGXB3Q12766 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
HMGXB3Q12766 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC31.48■■■□□ 2.63
HMGXB3Q12766 AC025580.3-201ENST00000617932 1424 ntBASIC31.48■■■□□ 2.63
HMGXB3Q12766 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
HMGXB3Q12766 AL627223.1-201ENST00000416693 442 ntBASIC31.48■■■□□ 2.63
HMGXB3Q12766 AC015922.1-201ENST00000421102 1152 ntBASIC31.48■■■□□ 2.63
HMGXB3Q12766 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC31.48■■■□□ 2.63
HMGXB3Q12766 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC31.48■■■□□ 2.63
HMGXB3Q12766 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC31.48■■■□□ 2.63
HMGXB3Q12766 DAD1-205ENST00000543337 501 ntTSL 3 BASIC31.48■■■□□ 2.63
HMGXB3Q12766 AC005225.4-201ENST00000557330 545 ntBASIC31.48■■■□□ 2.63
HMGXB3Q12766 AC004449.1-201ENST00000564240 433 ntBASIC31.48■■■□□ 2.63
HMGXB3Q12766 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
HMGXB3Q12766 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC31.48■■■□□ 2.63
HMGXB3Q12766 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC31.48■■■□□ 2.63
HMGXB3Q12766 AL158211.5-201ENST00000623583 2518 ntBASIC31.47■■■□□ 2.63
HMGXB3Q12766 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
HMGXB3Q12766 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
HMGXB3Q12766 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC31.47■■■□□ 2.63
HMGXB3Q12766 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
HMGXB3Q12766 AC005034.1-201ENST00000426657 489 ntBASIC31.47■■■□□ 2.63
HMGXB3Q12766 AC067863.1-201ENST00000494933 530 ntBASIC31.47■■■□□ 2.63
HMGXB3Q12766 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC31.47■■■□□ 2.63
HMGXB3Q12766 AC025678.2-201ENST00000562061 970 ntBASIC31.47■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms