Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm5P62322 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm5P62322 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm5P62322 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC12.66□□□□□ -0.38
Lsm5P62322 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm5P62322 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm5P62322 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm5P62322 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm5P62322 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Lsm5P62322 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.66□□□□□ -0.38
Lsm5P62322 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.65□□□□□ -0.38
Lsm5P62322 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm5P62322 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm5P62322 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm5P62322 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm5P62322 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm5P62322 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm5P62322 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm5P62322 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Lsm5P62322 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm5P62322 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm5P62322 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm5P62322 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Lsm5P62322 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Lsm5P62322 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm5P62322 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Lsm5P62322 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm5P62322 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC12.65□□□□□ -0.38
Lsm5P62322 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
Lsm5P62322 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm5P62322 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm5P62322 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm5P62322 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Lsm5P62322 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Lsm5P62322 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Lsm5P62322 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Lsm5P62322 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Lsm5P62322 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.64□□□□□ -0.39
Lsm5P62322 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Lsm5P62322 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Gm13474-201ENSMUST00000122466 815 ntBASIC12.64□□□□□ -0.39
Lsm5P62322 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.64□□□□□ -0.39
Lsm5P62322 Gm10052-201ENSMUST00000168019 960 ntBASIC12.64□□□□□ -0.39
Lsm5P62322 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Gm7729-201ENSMUST00000050143 801 ntBASIC12.64□□□□□ -0.39
Lsm5P62322 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC12.64□□□□□ -0.39
Lsm5P62322 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.64□□□□□ -0.39
Lsm5P62322 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.64□□□□□ -0.39
Lsm5P62322 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Lsm5P62322 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.64□□□□□ -0.39
Lsm5P62322 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Lsm5P62322 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm5P62322 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm5P62322 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm5P62322 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm5P62322 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm5P62322 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Lsm5P62322 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm5P62322 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Lsm5P62322 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm5P62322 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm5P62322 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm5P62322 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm5P62322 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm5P62322 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm5P62322 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.63□□□□□ -0.39
Lsm5P62322 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC12.63□□□□□ -0.39
Lsm5P62322 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
Lsm5P62322 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm5P62322 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Lsm5P62322 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm5P62322 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm5P62322 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.63□□□□□ -0.39
Lsm5P62322 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm5P62322 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Lsm5P62322 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Lsm5P62322 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.62□□□□□ -0.39
Lsm5P62322 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Lsm5P62322 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Lsm5P62322 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms