Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cpsf4lE9Q2N0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Gm13597-201ENSMUST00000121239 375 ntBASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Gm5364-201ENSMUST00000216789 889 ntBASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cpsf4lE9Q2N0 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cpsf4lE9Q2N0 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cpsf4lE9Q2N0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms