Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 AC060766.5-201ENST00000590539 871 ntBASIC17.12■□□□□ 0.33
AP4S1Q9Y587 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.12■□□□□ 0.33
AP4S1Q9Y587 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
AP4S1Q9Y587 NBPF21P-201ENST00000425093 1451 ntBASIC17.12■□□□□ 0.33
AP4S1Q9Y587 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 AC004264.1-201ENST00000608354 794 ntBASIC17.11■□□□□ 0.33
AP4S1Q9Y587 AL050303.2-201ENST00000619798 666 ntBASIC17.11■□□□□ 0.33
AP4S1Q9Y587 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
AP4S1Q9Y587 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 AC093010.1-201ENST00000473625 1624 ntBASIC17.1■□□□□ 0.33
AP4S1Q9Y587 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 PRKY-204ENST00000533551 1019 ntBASIC17.1■□□□□ 0.33
AP4S1Q9Y587 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 SOX15-203ENST00000570788 1093 ntBASIC17.1■□□□□ 0.33
AP4S1Q9Y587 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.1■□□□□ 0.33
AP4S1Q9Y587 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 AC133963.1-201ENST00000504166 1679 ntBASIC17.1■□□□□ 0.33
AP4S1Q9Y587 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP4S1Q9Y587 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP4S1Q9Y587 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms