Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 AC126763.1-201ENST00000552015 2118 ntBASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 AC112777.1-201ENST00000540175 1423 ntBASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.7■□□□□ 0.26
NPIPA1Q9UND3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 AC090616.6-201ENST00000582640 721 ntBASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA1Q9UND3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 AC246785.2-201ENST00000432512 513 ntBASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 AC024563.2-201ENST00000603282 481 ntBASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 AL390719.2-201ENST00000606993 987 ntBASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 IFNL4P1-201ENST00000607083 540 ntBASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 AL732292.2-201ENST00000609649 430 ntBASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.68■□□□□ 0.26
NPIPA1Q9UND3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms