Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm27359-201ENSMUST00000184153 110 ntBASIC17.87■□□□□ 0.45
Col20a1Q923P0 Gm27785-201ENSMUST00000184268 110 ntBASIC17.87■□□□□ 0.45
Col20a1Q923P0 Gm27466-201ENSMUST00000184396 110 ntBASIC17.87■□□□□ 0.45
Col20a1Q923P0 Gm27703-201ENSMUST00000184836 110 ntBASIC17.87■□□□□ 0.45
Col20a1Q923P0 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.87■□□□□ 0.45
Col20a1Q923P0 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col20a1Q923P0 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col20a1Q923P0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col20a1Q923P0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col20a1Q923P0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col20a1Q923P0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col20a1Q923P0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col20a1Q923P0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
Col20a1Q923P0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Col20a1Q923P0 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col20a1Q923P0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col20a1Q923P0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col20a1Q923P0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Col20a1Q923P0 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col20a1Q923P0 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.86■□□□□ 0.45
Col20a1Q923P0 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col20a1Q923P0 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.86■□□□□ 0.45
Col20a1Q923P0 Gm11543-201ENSMUST00000120758 370 ntBASIC17.86■□□□□ 0.45
Col20a1Q923P0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col20a1Q923P0 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Col20a1Q923P0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.86■□□□□ 0.45
Col20a1Q923P0 Gm8597-201ENSMUST00000191525 1109 ntBASIC17.86■□□□□ 0.45
Col20a1Q923P0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC17.86■□□□□ 0.45
Col20a1Q923P0 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.86■□□□□ 0.45
Col20a1Q923P0 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Col20a1Q923P0 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col20a1Q923P0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col20a1Q923P0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col20a1Q923P0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col20a1Q923P0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Col20a1Q923P0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col20a1Q923P0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.86■□□□□ 0.45
Col20a1Q923P0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Col20a1Q923P0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.85■□□□□ 0.45
Col20a1Q923P0 Mir6956-201ENSMUST00000183598 62 ntBASIC17.85■□□□□ 0.45
Col20a1Q923P0 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 AC139382.1-201ENSMUST00000221402 498 ntBASIC17.85■□□□□ 0.45
Col20a1Q923P0 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.85■□□□□ 0.45
Col20a1Q923P0 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Col20a1Q923P0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col20a1Q923P0 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Prob1-201ENSMUST00000097619 3021 ntBASIC17.84■□□□□ 0.45
Col20a1Q923P0 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Auts2-212ENSMUST00000178555 309 ntBASIC17.84■□□□□ 0.45
Col20a1Q923P0 Gm10576-201ENSMUST00000191927 825 ntBASIC17.84■□□□□ 0.45
Col20a1Q923P0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Gm5049-201ENSMUST00000195878 1590 ntBASIC17.84■□□□□ 0.45
Col20a1Q923P0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Col20a1Q923P0 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Col20a1Q923P0 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms