Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
ABCA6Q8N139 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ABCA6Q8N139 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC26.63■■□□□ 1.85
ABCA6Q8N139 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
ABCA6Q8N139 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
ABCA6Q8N139 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC26.63■■□□□ 1.85
ABCA6Q8N139 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
ABCA6Q8N139 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
ABCA6Q8N139 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
ABCA6Q8N139 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
ABCA6Q8N139 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
ABCA6Q8N139 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC26.63■■□□□ 1.85
ABCA6Q8N139 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
ABCA6Q8N139 PRSS29P-201ENST00000440800 595 ntBASIC26.63■■□□□ 1.85
ABCA6Q8N139 CEND1P1-201ENST00000451006 455 ntBASIC26.63■■□□□ 1.85
ABCA6Q8N139 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC26.63■■□□□ 1.85
ABCA6Q8N139 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC26.63■■□□□ 1.85
ABCA6Q8N139 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
ABCA6Q8N139 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ABCA6Q8N139 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ABCA6Q8N139 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
ABCA6Q8N139 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
ABCA6Q8N139 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ABCA6Q8N139 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ABCA6Q8N139 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
ABCA6Q8N139 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC26.62■■□□□ 1.85
ABCA6Q8N139 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC26.62■■□□□ 1.85
ABCA6Q8N139 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC26.62■■□□□ 1.85
ABCA6Q8N139 COX5A-202ENST00000562233 441 ntTSL 3 BASIC26.62■■□□□ 1.85
ABCA6Q8N139 AL096865.1-201ENST00000606796 927 ntBASIC26.62■■□□□ 1.85
ABCA6Q8N139 CITED2-204ENST00000618718 901 ntTSL 2 BASIC26.62■■□□□ 1.85
ABCA6Q8N139 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC26.62■■□□□ 1.85
ABCA6Q8N139 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
ABCA6Q8N139 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
ABCA6Q8N139 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC26.62■■□□□ 1.85
ABCA6Q8N139 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
ABCA6Q8N139 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
ABCA6Q8N139 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
ABCA6Q8N139 KLK8-202ENST00000320838 456 ntTSL 5 BASIC26.61■■□□□ 1.85
ABCA6Q8N139 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ABCA6Q8N139 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ABCA6Q8N139 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ABCA6Q8N139 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ABCA6Q8N139 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC26.61■■□□□ 1.85
ABCA6Q8N139 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC26.61■■□□□ 1.85
ABCA6Q8N139 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
ABCA6Q8N139 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
ABCA6Q8N139 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ABCA6Q8N139 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
ABCA6Q8N139 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
ABCA6Q8N139 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
ABCA6Q8N139 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ABCA6Q8N139 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
ABCA6Q8N139 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
ABCA6Q8N139 CBR1-202ENST00000399191 838 ntTSL 3 BASIC26.61■■□□□ 1.85
ABCA6Q8N139 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
ABCA6Q8N139 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
ABCA6Q8N139 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC26.61■■□□□ 1.85
ABCA6Q8N139 AC093512.1-201ENST00000617969 520 ntBASIC26.61■■□□□ 1.85
ABCA6Q8N139 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
ABCA6Q8N139 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ABCA6Q8N139 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ABCA6Q8N139 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
ABCA6Q8N139 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ABCA6Q8N139 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC26.6■■□□□ 1.85
ABCA6Q8N139 VN2R19P-201ENST00000442399 1052 ntBASIC26.6■■□□□ 1.85
ABCA6Q8N139 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
ABCA6Q8N139 KRT19P2-202ENST00000557173 1012 ntBASIC26.6■■□□□ 1.85
ABCA6Q8N139 CYB561-217ENST00000582997 877 ntTSL 5 BASIC26.6■■□□□ 1.85
ABCA6Q8N139 AC005498.2-205ENST00000593218 784 ntBASIC26.6■■□□□ 1.85
ABCA6Q8N139 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC26.6■■□□□ 1.85
ABCA6Q8N139 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.6■■□□□ 1.85
ABCA6Q8N139 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ABCA6Q8N139 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ABCA6Q8N139 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC26.6■■□□□ 1.85
ABCA6Q8N139 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC26.59■■□□□ 1.85
ABCA6Q8N139 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ABCA6Q8N139 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
ABCA6Q8N139 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
ABCA6Q8N139 METTL26-205ENST00000397666 726 ntTSL 2 BASIC26.59■■□□□ 1.85
ABCA6Q8N139 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
ABCA6Q8N139 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC26.59■■□□□ 1.85
ABCA6Q8N139 AC005082.1-201ENST00000413042 2259 ntBASIC26.59■■□□□ 1.85
ABCA6Q8N139 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
ABCA6Q8N139 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC26.59■■□□□ 1.85
ABCA6Q8N139 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ABCA6Q8N139 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.85
ABCA6Q8N139 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
ABCA6Q8N139 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC26.58■■□□□ 1.85
ABCA6Q8N139 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
ABCA6Q8N139 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC26.58■■□□□ 1.85
ABCA6Q8N139 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC26.58■■□□□ 1.85
ABCA6Q8N139 PC-214ENST00000628663 1470 ntTSL 5 BASIC26.58■■□□□ 1.85
ABCA6Q8N139 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
ABCA6Q8N139 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
ABCA6Q8N139 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC26.58■■□□□ 1.85
ABCA6Q8N139 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
ABCA6Q8N139 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
ABCA6Q8N139 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
ABCA6Q8N139 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC26.58■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms