Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Scarb1Q61009 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.83□□□□□ -0.36
Scarb1Q61009 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.83□□□□□ -0.36
Scarb1Q61009 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scarb1Q61009 Gm21559-201ENSMUST00000220638 855 ntBASIC12.83□□□□□ -0.36
Scarb1Q61009 Gm8587-201ENSMUST00000076538 843 ntBASIC12.83□□□□□ -0.36
Scarb1Q61009 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scarb1Q61009 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.83□□□□□ -0.36
Scarb1Q61009 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.83□□□□□ -0.36
Scarb1Q61009 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scarb1Q61009 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Scarb1Q61009 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.83□□□□□ -0.36
Scarb1Q61009 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scarb1Q61009 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scarb1Q61009 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Scarb1Q61009 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Scarb1Q61009 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.83□□□□□ -0.36
Scarb1Q61009 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Scarb1Q61009 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Scarb1Q61009 Gm11355-201ENSMUST00000121120 306 ntBASIC12.82□□□□□ -0.36
Scarb1Q61009 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC12.82□□□□□ -0.36
Scarb1Q61009 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Scarb1Q61009 Gm7889-201ENSMUST00000185591 958 ntBASIC12.82□□□□□ -0.36
Scarb1Q61009 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.82□□□□□ -0.36
Scarb1Q61009 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Scarb1Q61009 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Scarb1Q61009 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Scarb1Q61009 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Scarb1Q61009 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.82□□□□□ -0.36
Scarb1Q61009 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Scarb1Q61009 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Scarb1Q61009 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scarb1Q61009 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scarb1Q61009 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scarb1Q61009 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scarb1Q61009 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scarb1Q61009 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scarb1Q61009 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scarb1Q61009 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scarb1Q61009 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scarb1Q61009 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC12.81□□□□□ -0.36
Scarb1Q61009 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.81□□□□□ -0.36
Scarb1Q61009 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC12.81□□□□□ -0.36
Scarb1Q61009 AC134329.2-201ENSMUST00000217897 428 ntBASIC12.81□□□□□ -0.36
Scarb1Q61009 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scarb1Q61009 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scarb1Q61009 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scarb1Q61009 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scarb1Q61009 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scarb1Q61009 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scarb1Q61009 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Scarb1Q61009 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.81□□□□□ -0.36
Scarb1Q61009 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.81□□□□□ -0.36
Scarb1Q61009 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Scarb1Q61009 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scarb1Q61009 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scarb1Q61009 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scarb1Q61009 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Scarb1Q61009 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Scarb1Q61009 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scarb1Q61009 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Scarb1Q61009 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scarb1Q61009 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Scarb1Q61009 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Scarb1Q61009 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scarb1Q61009 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scarb1Q61009 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Scarb1Q61009 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scarb1Q61009 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scarb1Q61009 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.8□□□□□ -0.36
Scarb1Q61009 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scarb1Q61009 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scarb1Q61009 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Scarb1Q61009 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms