Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav8d-1Q5R1H8 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Gm7367-201ENSMUST00000057611 492 ntBASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav8d-1Q5R1H8 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Trav8d-1Q5R1H8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav8d-1Q5R1H8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Trav8d-1Q5R1H8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms