Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Olfr129-201ENSMUST00000122318 993 ntBASIC10.9□□□□□ -0.66
Ube2d3P61079 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC10.9□□□□□ -0.66
Ube2d3P61079 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC10.9□□□□□ -0.66
Ube2d3P61079 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ube2d3P61079 Gm27742-201ENSMUST00000184667 60 ntBASIC10.9□□□□□ -0.66
Ube2d3P61079 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC10.9□□□□□ -0.66
Ube2d3P61079 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ube2d3P61079 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ube2d3P61079 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Ube2d3P61079 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Ube2d3P61079 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ube2d3P61079 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ube2d3P61079 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.66
Ube2d3P61079 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ube2d3P61079 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Ube2d3P61079 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ube2d3P61079 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ube2d3P61079 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ube2d3P61079 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Ube2d3P61079 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Ube2d3P61079 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC10.89□□□□□ -0.67
Ube2d3P61079 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC10.89□□□□□ -0.67
Ube2d3P61079 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC10.89□□□□□ -0.67
Ube2d3P61079 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Ube2d3P61079 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Gm13836-201ENSMUST00000121159 501 ntBASIC10.89□□□□□ -0.67
Ube2d3P61079 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC10.89□□□□□ -0.67
Ube2d3P61079 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Mir7071-201ENSMUST00000184847 69 ntBASIC10.89□□□□□ -0.67
Ube2d3P61079 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Ube2d3P61079 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Gm13337-201ENSMUST00000119183 1594 ntBASIC10.89□□□□□ -0.67
Ube2d3P61079 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC10.89□□□□□ -0.67
Ube2d3P61079 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC10.89□□□□□ -0.67
Ube2d3P61079 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Ube2d3P61079 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ube2d3P61079 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ube2d3P61079 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ube2d3P61079 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ube2d3P61079 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ube2d3P61079 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ube2d3P61079 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ube2d3P61079 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ube2d3P61079 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ube2d3P61079 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC10.88□□□□□ -0.67
Ube2d3P61079 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC10.88□□□□□ -0.67
Ube2d3P61079 Vti1a-206ENSMUST00000225529 1244 ntBASIC10.88□□□□□ -0.67
Ube2d3P61079 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ube2d3P61079 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ube2d3P61079 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Ube2d3P61079 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ube2d3P61079 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ube2d3P61079 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ube2d3P61079 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ube2d3P61079 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ube2d3P61079 Gm12620-201ENSMUST00000119791 1986 ntBASIC10.88□□□□□ -0.67
Ube2d3P61079 Gm12612-201ENSMUST00000140182 1986 ntBASIC10.88□□□□□ -0.67
Ube2d3P61079 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Ube2d3P61079 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ube2d3P61079 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ube2d3P61079 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ube2d3P61079 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Ube2d3P61079 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Ube2d3P61079 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Ube2d3P61079 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube2d3P61079 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube2d3P61079 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Ube2d3P61079 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms