Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.76■□□□□ 0.75
HOXD13P35453 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
HOXD13P35453 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HOXD13P35453 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXD13P35453 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXD13P35453 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXD13P35453 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXD13P35453 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HOXD13P35453 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXD13P35453 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXD13P35453 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HOXD13P35453 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HOXD13P35453 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXD13P35453 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC19.75■□□□□ 0.75
HOXD13P35453 AC068472.1-201ENST00000474589 881 ntBASIC19.75■□□□□ 0.75
HOXD13P35453 AC011498.5-201ENST00000592027 486 ntBASIC19.75■□□□□ 0.75
HOXD13P35453 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXD13P35453 AL445228.2-201ENST00000605589 952 ntBASIC19.75■□□□□ 0.75
HOXD13P35453 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXD13P35453 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXD13P35453 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.75■□□□□ 0.75
HOXD13P35453 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HOXD13P35453 PCDHB18P-201ENST00000524813 2368 ntBASIC19.75■□□□□ 0.75
HOXD13P35453 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.74■□□□□ 0.75
HOXD13P35453 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
HOXD13P35453 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD13P35453 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD13P35453 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD13P35453 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD13P35453 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HOXD13P35453 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HOXD13P35453 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXD13P35453 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD13P35453 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD13P35453 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXD13P35453 AC116407.4-201ENST00000623319 1061 ntBASIC19.74■□□□□ 0.75
HOXD13P35453 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD13P35453 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD13P35453 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.74■□□□□ 0.75
HOXD13P35453 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HOXD13P35453 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.74■□□□□ 0.75
HOXD13P35453 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
HOXD13P35453 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HOXD13P35453 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD13P35453 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXD13P35453 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXD13P35453 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
HOXD13P35453 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HOXD13P35453 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD13P35453 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD13P35453 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HOXD13P35453 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD13P35453 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD13P35453 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD13P35453 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD13P35453 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXD13P35453 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXD13P35453 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXD13P35453 TSPY12P-201ENST00000421279 868 ntBASIC19.73■□□□□ 0.75
HOXD13P35453 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HOXD13P35453 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXD13P35453 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.73■□□□□ 0.75
HOXD13P35453 AC010331.1-201ENST00000611423 582 ntBASIC19.73■□□□□ 0.75
HOXD13P35453 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD13P35453 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
HOXD13P35453 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.73■□□□□ 0.75
HOXD13P35453 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
HOXD13P35453 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXD13P35453 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXD13P35453 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
HOXD13P35453 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.73■□□□□ 0.75
HOXD13P35453 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD13P35453 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD13P35453 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD13P35453 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD13P35453 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HOXD13P35453 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.72■□□□□ 0.75
HOXD13P35453 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXD13P35453 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXD13P35453 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXD13P35453 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.72■□□□□ 0.75
HOXD13P35453 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXD13P35453 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.72■□□□□ 0.75
HOXD13P35453 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
HOXD13P35453 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
HOXD13P35453 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXD13P35453 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXD13P35453 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HOXD13P35453 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.72■□□□□ 0.75
HOXD13P35453 AL845331.1-201ENST00000424978 1190 ntBASIC19.72■□□□□ 0.75
HOXD13P35453 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
HOXD13P35453 TSPY22P-201ENST00000427496 604 ntBASIC19.72■□□□□ 0.75
HOXD13P35453 RN7SL606P-201ENST00000472779 293 ntBASIC19.72■□□□□ 0.75
HOXD13P35453 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.72■□□□□ 0.75
HOXD13P35453 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXD13P35453 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.72■□□□□ 0.75
HOXD13P35453 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HOXD13P35453 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.72■□□□□ 0.75
HOXD13P35453 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.72■□□□□ 0.75
HOXD13P35453 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms