Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
TcraP01849 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC11.12□□□□□ -0.63
TcraP01849 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.12□□□□□ -0.63
TcraP01849 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.12□□□□□ -0.63
TcraP01849 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
TcraP01849 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC11.12□□□□□ -0.63
TcraP01849 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC11.11□□□□□ -0.63
TcraP01849 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
TcraP01849 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
TcraP01849 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
TcraP01849 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
TcraP01849 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.11□□□□□ -0.63
TcraP01849 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
TcraP01849 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.11□□□□□ -0.63
TcraP01849 Gm18115-201ENSMUST00000221209 621 ntBASIC11.11□□□□□ -0.63
TcraP01849 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
TcraP01849 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC11.11□□□□□ -0.63
TcraP01849 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
TcraP01849 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
TcraP01849 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
TcraP01849 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC11.11□□□□□ -0.63
TcraP01849 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
TcraP01849 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TcraP01849 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TcraP01849 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TcraP01849 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TcraP01849 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TcraP01849 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
TcraP01849 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TcraP01849 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TcraP01849 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TcraP01849 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
TcraP01849 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TcraP01849 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TcraP01849 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TcraP01849 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.1□□□□□ -0.63
TcraP01849 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
TcraP01849 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.1□□□□□ -0.63
TcraP01849 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
TcraP01849 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TcraP01849 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TcraP01849 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC11.1□□□□□ -0.63
TcraP01849 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.1□□□□□ -0.63
TcraP01849 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
TcraP01849 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
TcraP01849 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TcraP01849 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TcraP01849 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TcraP01849 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
TcraP01849 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.1□□□□□ -0.63
TcraP01849 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
TcraP01849 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
TcraP01849 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Camk2g-217ENSMUST00000226630 1937 ntBASIC11.09□□□□□ -0.63
TcraP01849 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TcraP01849 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms