Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Lsm2O35900 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.53□□□□□ -0.24
Lsm2O35900 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
Lsm2O35900 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.53□□□□□ -0.24
Lsm2O35900 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.53□□□□□ -0.24
Lsm2O35900 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Lsm2O35900 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.52□□□□□ -0.24
Lsm2O35900 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm2O35900 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm2O35900 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm2O35900 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.52□□□□□ -0.24
Lsm2O35900 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm2O35900 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm2O35900 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm2O35900 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Lsm2O35900 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Lsm2O35900 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm2O35900 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.52□□□□□ -0.25
Lsm2O35900 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC13.52□□□□□ -0.25
Lsm2O35900 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm2O35900 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm2O35900 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.52□□□□□ -0.25
Lsm2O35900 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm2O35900 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm2O35900 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm2O35900 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Lsm2O35900 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm2O35900 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.52□□□□□ -0.25
Lsm2O35900 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm2O35900 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.52□□□□□ -0.25
Lsm2O35900 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Lsm2O35900 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Lsm2O35900 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Lsm2O35900 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm2O35900 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm2O35900 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm2O35900 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm2O35900 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm2O35900 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm2O35900 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Lsm2O35900 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Lsm2O35900 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Lsm2O35900 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.51□□□□□ -0.25
Lsm2O35900 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Lsm2O35900 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.51□□□□□ -0.25
Lsm2O35900 Gm19164-201ENSMUST00000210667 640 ntBASIC13.51□□□□□ -0.25
Lsm2O35900 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Gm10812-201ENSMUST00000099864 546 ntBASIC13.51□□□□□ -0.25
Lsm2O35900 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Lsm2O35900 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Lsm2O35900 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms