Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC099343.3-201ENST00000605834 2503 ntBASIC18.31■□□□□ 0.52
AP3B1O00203 FZD10-202ENST00000539839 3282 ntBASIC18.31■□□□□ 0.52
AP3B1O00203 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
AP3B1O00203 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.31■□□□□ 0.52
AP3B1O00203 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.31■□□□□ 0.52
AP3B1O00203 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
AP3B1O00203 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
AP3B1O00203 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
AP3B1O00203 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
AP3B1O00203 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.31■□□□□ 0.52
AP3B1O00203 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
AP3B1O00203 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP3B1O00203 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
AP3B1O00203 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3B1O00203 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.3■□□□□ 0.52
AP3B1O00203 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
AP3B1O00203 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
AP3B1O00203 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP3B1O00203 PCDHB18P-201ENST00000524813 2368 ntBASIC18.3■□□□□ 0.52
AP3B1O00203 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP3B1O00203 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
AP3B1O00203 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP3B1O00203 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.3■□□□□ 0.52
AP3B1O00203 AL596275.1-201ENST00000423464 877 ntBASIC18.3■□□□□ 0.52
AP3B1O00203 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.3■□□□□ 0.52
AP3B1O00203 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.3■□□□□ 0.52
AP3B1O00203 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.3■□□□□ 0.52
AP3B1O00203 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.3■□□□□ 0.52
AP3B1O00203 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3B1O00203 KRT89P-201ENST00000620027 1478 ntBASIC18.3■□□□□ 0.52
AP3B1O00203 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3B1O00203 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3B1O00203 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP3B1O00203 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3B1O00203 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
AP3B1O00203 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3B1O00203 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
AP3B1O00203 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3B1O00203 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3B1O00203 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
AP3B1O00203 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
AP3B1O00203 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.3■□□□□ 0.52
AP3B1O00203 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP3B1O00203 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.29■□□□□ 0.52
AP3B1O00203 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
AP3B1O00203 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP3B1O00203 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
AP3B1O00203 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP3B1O00203 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP3B1O00203 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
AP3B1O00203 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP3B1O00203 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.29■□□□□ 0.52
AP3B1O00203 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.29■□□□□ 0.52
AP3B1O00203 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.29■□□□□ 0.52
AP3B1O00203 AL138966.2-201ENST00000621997 464 ntBASIC18.29■□□□□ 0.52
AP3B1O00203 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
AP3B1O00203 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.29■□□□□ 0.52
AP3B1O00203 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP3B1O00203 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
AP3B1O00203 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP3B1O00203 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP3B1O00203 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
AP3B1O00203 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
AP3B1O00203 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP3B1O00203 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.29■□□□□ 0.52
AP3B1O00203 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP3B1O00203 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
AP3B1O00203 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
AP3B1O00203 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
AP3B1O00203 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.29■□□□□ 0.52
AP3B1O00203 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
AP3B1O00203 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
AP3B1O00203 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3B1O00203 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3B1O00203 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP3B1O00203 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3B1O00203 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3B1O00203 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
AP3B1O00203 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP3B1O00203 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3B1O00203 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3B1O00203 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP3B1O00203 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP3B1O00203 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
AP3B1O00203 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
AP3B1O00203 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3B1O00203 LIN28AP1-201ENST00000429574 405 ntBASIC18.28■□□□□ 0.52
AP3B1O00203 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.28■□□□□ 0.52
AP3B1O00203 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
AP3B1O00203 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.28■□□□□ 0.52
AP3B1O00203 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.28■□□□□ 0.52
AP3B1O00203 AC140113.3-201ENST00000605663 199 ntBASIC18.28■□□□□ 0.52
AP3B1O00203 AC116407.2-201ENST00000613639 860 ntBASIC18.28■□□□□ 0.52
AP3B1O00203 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
AP3B1O00203 AC006116.8-202ENST00000587620 1550 ntBASIC18.28■□□□□ 0.52
AP3B1O00203 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.28■□□□□ 0.52
AP3B1O00203 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
AP3B1O00203 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3B1O00203 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
AP3B1O00203 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms