Protein–RNA interactions for Protein: Q9R0T8

Ikbke, Inhibitor of nuclear factor kappa-B kinase subunit epsilon, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkeQ9R0T8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
IkbkeQ9R0T8 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.35■■□□□ 1.33
IkbkeQ9R0T8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
IkbkeQ9R0T8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
IkbkeQ9R0T8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
IkbkeQ9R0T8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
IkbkeQ9R0T8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.34■■□□□ 1.33
IkbkeQ9R0T8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
IkbkeQ9R0T8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
IkbkeQ9R0T8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
IkbkeQ9R0T8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
IkbkeQ9R0T8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.33■■□□□ 1.32
IkbkeQ9R0T8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.32■■□□□ 1.32
IkbkeQ9R0T8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
IkbkeQ9R0T8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
IkbkeQ9R0T8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
IkbkeQ9R0T8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
IkbkeQ9R0T8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
IkbkeQ9R0T8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.31■■□□□ 1.32
IkbkeQ9R0T8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
IkbkeQ9R0T8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
IkbkeQ9R0T8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
IkbkeQ9R0T8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
IkbkeQ9R0T8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.3■■□□□ 1.32
IkbkeQ9R0T8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.3■■□□□ 1.32
IkbkeQ9R0T8 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
IkbkeQ9R0T8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
IkbkeQ9R0T8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC23.29■■□□□ 1.32
IkbkeQ9R0T8 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
IkbkeQ9R0T8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
IkbkeQ9R0T8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
IkbkeQ9R0T8 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
IkbkeQ9R0T8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
IkbkeQ9R0T8 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
IkbkeQ9R0T8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
IkbkeQ9R0T8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
IkbkeQ9R0T8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
IkbkeQ9R0T8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
IkbkeQ9R0T8 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC23.26■■□□□ 1.31
IkbkeQ9R0T8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.26■■□□□ 1.31
IkbkeQ9R0T8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
IkbkeQ9R0T8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
IkbkeQ9R0T8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
IkbkeQ9R0T8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
IkbkeQ9R0T8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
IkbkeQ9R0T8 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
IkbkeQ9R0T8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
IkbkeQ9R0T8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
IkbkeQ9R0T8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
IkbkeQ9R0T8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
IkbkeQ9R0T8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
IkbkeQ9R0T8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
IkbkeQ9R0T8 Gm10420-201ENSMUST00000121713 882 ntBASIC23.23■■□□□ 1.31
IkbkeQ9R0T8 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.23■■□□□ 1.31
IkbkeQ9R0T8 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
IkbkeQ9R0T8 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
IkbkeQ9R0T8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.23■■□□□ 1.31
IkbkeQ9R0T8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
IkbkeQ9R0T8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
IkbkeQ9R0T8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
IkbkeQ9R0T8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
IkbkeQ9R0T8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
IkbkeQ9R0T8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
IkbkeQ9R0T8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.22■■□□□ 1.31
IkbkeQ9R0T8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
IkbkeQ9R0T8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
IkbkeQ9R0T8 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
IkbkeQ9R0T8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.21■■□□□ 1.31
IkbkeQ9R0T8 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
IkbkeQ9R0T8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
IkbkeQ9R0T8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
IkbkeQ9R0T8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.2■■□□□ 1.3
IkbkeQ9R0T8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
IkbkeQ9R0T8 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.2■■□□□ 1.3
IkbkeQ9R0T8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
IkbkeQ9R0T8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.19■■□□□ 1.3
IkbkeQ9R0T8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
IkbkeQ9R0T8 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
IkbkeQ9R0T8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
IkbkeQ9R0T8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
IkbkeQ9R0T8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
IkbkeQ9R0T8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
IkbkeQ9R0T8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
IkbkeQ9R0T8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.16■■□□□ 1.3
IkbkeQ9R0T8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
IkbkeQ9R0T8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.15■■□□□ 1.3
IkbkeQ9R0T8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
IkbkeQ9R0T8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
IkbkeQ9R0T8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
IkbkeQ9R0T8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
IkbkeQ9R0T8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
IkbkeQ9R0T8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
IkbkeQ9R0T8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.13■■□□□ 1.29
IkbkeQ9R0T8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
IkbkeQ9R0T8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
IkbkeQ9R0T8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
IkbkeQ9R0T8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
IkbkeQ9R0T8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
IkbkeQ9R0T8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
IkbkeQ9R0T8 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms