Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19,61■□□□□ 0,73
Nubp1Q9R060 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19,61■□□□□ 0,73
Nubp1Q9R060 Fezf2-202ENSMUST00000224023 1917 ntBASIC19,61■□□□□ 0,73
Nubp1Q9R060 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC19,61■□□□□ 0,73
Nubp1Q9R060 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19,6■□□□□ 0,73
Nubp1Q9R060 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19,6■□□□□ 0,73
Nubp1Q9R060 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19,6■□□□□ 0,73
Nubp1Q9R060 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19,6■□□□□ 0,73
Nubp1Q9R060 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19,6■□□□□ 0,73
Nubp1Q9R060 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19,6■□□□□ 0,73
Nubp1Q9R060 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC19,6■□□□□ 0,73
Nubp1Q9R060 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19,59■□□□□ 0,73
Nubp1Q9R060 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC19,59■□□□□ 0,73
Nubp1Q9R060 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19,59■□□□□ 0,73
Nubp1Q9R060 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19,59■□□□□ 0,73
Nubp1Q9R060 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19,59■□□□□ 0,73
Nubp1Q9R060 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19,59■□□□□ 0,73
Nubp1Q9R060 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19,58■□□□□ 0,73
Nubp1Q9R060 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19,58■□□□□ 0,72
Nubp1Q9R060 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19,58■□□□□ 0,72
Nubp1Q9R060 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19,58■□□□□ 0,72
Nubp1Q9R060 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19,57■□□□□ 0,72
Nubp1Q9R060 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19,57■□□□□ 0,72
Nubp1Q9R060 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19,57■□□□□ 0,72
Nubp1Q9R060 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19,57■□□□□ 0,72
Nubp1Q9R060 Gm9959-201ENSMUST00000068277 390 ntBASIC19,57■□□□□ 0,72
Nubp1Q9R060 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC19,57■□□□□ 0,72
Nubp1Q9R060 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19,56■□□□□ 0,72
Nubp1Q9R060 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19,56■□□□□ 0,72
Nubp1Q9R060 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19,56■□□□□ 0,72
Nubp1Q9R060 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19,56■□□□□ 0,72
Nubp1Q9R060 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC19,56■□□□□ 0,72
Nubp1Q9R060 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19,56■□□□□ 0,72
Nubp1Q9R060 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19,56■□□□□ 0,72
Nubp1Q9R060 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19,55■□□□□ 0,72
Nubp1Q9R060 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC19,55■□□□□ 0,72
Nubp1Q9R060 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19,55■□□□□ 0,72
Nubp1Q9R060 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19,54■□□□□ 0,72
Nubp1Q9R060 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19,53■□□□□ 0,72
Nubp1Q9R060 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19,53■□□□□ 0,72
Nubp1Q9R060 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19,53■□□□□ 0,72
Nubp1Q9R060 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19,52■□□□□ 0,72
Nubp1Q9R060 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19,52■□□□□ 0,72
Nubp1Q9R060 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19,52■□□□□ 0,72
Nubp1Q9R060 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19,52■□□□□ 0,72
Nubp1Q9R060 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19,51■□□□□ 0,71
Nubp1Q9R060 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19,51■□□□□ 0,71
Nubp1Q9R060 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19,51■□□□□ 0,71
Nubp1Q9R060 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19,51■□□□□ 0,71
Nubp1Q9R060 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19,51■□□□□ 0,71
Nubp1Q9R060 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19,51■□□□□ 0,71
Nubp1Q9R060 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19,5■□□□□ 0,71
Nubp1Q9R060 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19,5■□□□□ 0,71
Nubp1Q9R060 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19,5■□□□□ 0,71
Nubp1Q9R060 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19,5■□□□□ 0,71
Nubp1Q9R060 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19,49■□□□□ 0,71
Nubp1Q9R060 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19,49■□□□□ 0,71
Nubp1Q9R060 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19,49■□□□□ 0,71
Nubp1Q9R060 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19,49■□□□□ 0,71
Nubp1Q9R060 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19,49■□□□□ 0,71
Nubp1Q9R060 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC19,48■□□□□ 0,71
Nubp1Q9R060 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19,48■□□□□ 0,71
Nubp1Q9R060 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC19,48■□□□□ 0,71
Nubp1Q9R060 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19,48■□□□□ 0,71
Nubp1Q9R060 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19,48■□□□□ 0,71
Nubp1Q9R060 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19,48■□□□□ 0,71
Nubp1Q9R060 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC19,47■□□□□ 0,71
Nubp1Q9R060 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19,47■□□□□ 0,71
Nubp1Q9R060 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19,47■□□□□ 0,71
Nubp1Q9R060 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19,47■□□□□ 0,71
Nubp1Q9R060 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC19,47■□□□□ 0,71
Nubp1Q9R060 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19,47■□□□□ 0,71
Nubp1Q9R060 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19,47■□□□□ 0,71
Nubp1Q9R060 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19,46■□□□□ 0,71
Nubp1Q9R060 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19,46■□□□□ 0,71
Nubp1Q9R060 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19,46■□□□□ 0,71
Nubp1Q9R060 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19,46■□□□□ 0,71
Nubp1Q9R060 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19,46■□□□□ 0,71
Nubp1Q9R060 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19,46■□□□□ 0,71
Nubp1Q9R060 AC117769.4-201ENSMUST00000225679 685 ntBASIC19,46■□□□□ 0,71
Nubp1Q9R060 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19,46■□□□□ 0,71
Nubp1Q9R060 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC19,46■□□□□ 0,71
Nubp1Q9R060 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19,45■□□□□ 0,7
Nubp1Q9R060 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19,45■□□□□ 0,7
Nubp1Q9R060 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19,45■□□□□ 0,7
Nubp1Q9R060 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19,45■□□□□ 0,7
Nubp1Q9R060 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19,45■□□□□ 0,7
Nubp1Q9R060 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19,45■□□□□ 0,7
Nubp1Q9R060 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19,45■□□□□ 0,7
Nubp1Q9R060 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19,45■□□□□ 0,7
Nubp1Q9R060 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19,44■□□□□ 0,7
Nubp1Q9R060 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19,44■□□□□ 0,7
Nubp1Q9R060 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19,44■□□□□ 0,7
Nubp1Q9R060 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19,43■□□□□ 0,7
Nubp1Q9R060 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19,43■□□□□ 0,7
Nubp1Q9R060 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC19,43■□□□□ 0,7
Nubp1Q9R060 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19,43■□□□□ 0,7
Nubp1Q9R060 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19,43■□□□□ 0,7
Nubp1Q9R060 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19,43■□□□□ 0,7
Nubp1Q9R060 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19,43■□□□□ 0,7
Retrieved 100 of 76,532 protein–RNA pairs in 23,9 ms