Protein–RNA interactions for Protein: Q9NR30

DDX21, Nucleolar RNA helicase 2, humanhuman

Known RBP eCLIP

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX21Q9NR30 IGF2BP3-208ENST00000469723 556 ntTSL 510.84□□□□□ -0.674e-6■□□□□ 8.3
DDX21Q9NR30 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.963e-13■□□□□ 8.1
DDX21Q9NR30 GTF2A1-201ENST00000298173 1677 ntTSL 231.35■■■□□ 2.615e-8■□□□□ 8.1
DDX21Q9NR30 YWHAG-201ENST00000307630 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.485e-8■□□□□ 8.1
DDX21Q9NR30 GTF2A1-204ENST00000556268 864 ntTSL 511.79□□□□□ -0.525e-8■□□□□ 8.1
DDX21Q9NR30 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.85e-8■□□□□ 8.1
DDX21Q9NR30 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC8.71□□□□□ -1.025e-8■□□□□ 8.1
DDX21Q9NR30 SNORA79-201ENST00000408376 140 ntBASIC1.63□□□□□ -2.155e-8■□□□□ 8.1
DDX21Q9NR30 GUK1-234ENST00000492871 1065 ntTSL 333.62■■■□□ 2.978e-6■□□□□ 8
DDX21Q9NR30 GUK1-215ENST00000462807 628 ntTSL 233.49■■■□□ 2.958e-6■□□□□ 8
DDX21Q9NR30 GUK1-227ENST00000485083 871 ntTSL 332.53■■■□□ 2.88e-6■□□□□ 8
DDX21Q9NR30 GUK1-235ENST00000493138 694 ntTSL 332.53■■■□□ 2.88e-6■□□□□ 8
DDX21Q9NR30 GUK1-208ENST00000366728 842 ntTSL 2 BASIC31.48■■■□□ 2.638e-6■□□□□ 8
DDX21Q9NR30 GUK1-205ENST00000366722 850 ntTSL 3 BASIC29■■■□□ 2.238e-6■□□□□ 8
DDX21Q9NR30 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC28.4■■■□□ 2.148e-6■□□□□ 8
DDX21Q9NR30 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC28.03■■■□□ 2.088e-6■□□□□ 8
DDX21Q9NR30 GUK1-213ENST00000453943 656 ntTSL 1 (best)27.45■■□□□ 1.988e-6■□□□□ 8
DDX21Q9NR30 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC26.4■■□□□ 1.828e-6■□□□□ 8
DDX21Q9NR30 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC26.38■■□□□ 1.818e-6■□□□□ 8
DDX21Q9NR30 PIP5K1C-208ENST00000637724 435 ntTSL 326.32■■□□□ 1.88e-6■□□□□ 8
DDX21Q9NR30 GUK1-236ENST00000493209 735 ntTSL 525.39■■□□□ 1.668e-6■□□□□ 8
DDX21Q9NR30 GUK1-204ENST00000366721 689 ntTSL 3 BASIC24.34■■□□□ 1.498e-6■□□□□ 8
DDX21Q9NR30 GUK1-230ENST00000485838 774 ntTSL 323.84■■□□□ 1.418e-6■□□□□ 8
DDX21Q9NR30 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.168e-6■□□□□ 8
DDX21Q9NR30 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.048e-6■□□□□ 8
DDX21Q9NR30 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.028e-6■□□□□ 8
DDX21Q9NR30 PIP5K1C-204ENST00000587482 1311 ntTSL 521.07■□□□□ 0.968e-6■□□□□ 8
DDX21Q9NR30 GUK1-214ENST00000460224 639 ntTSL 520.23■□□□□ 0.838e-6■□□□□ 8
DDX21Q9NR30 GUK1-238ENST00000498092 865 ntTSL 519.94■□□□□ 0.788e-6■□□□□ 8
DDX21Q9NR30 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.64■□□□□ 0.738e-6■□□□□ 8
DDX21Q9NR30 DAZAP1-209ENST00000590419 508 ntTSL 318.97■□□□□ 0.638e-6■□□□□ 8
DDX21Q9NR30 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.598e-6■□□□□ 8
DDX21Q9NR30 GUK1-226ENST00000484953 273 ntTSL 218.08■□□□□ 0.488e-6■□□□□ 8
DDX21Q9NR30 GUK1-233ENST00000491613 959 ntTSL 317.69■□□□□ 0.428e-6■□□□□ 8
DDX21Q9NR30 GUK1-211ENST00000412265 1012 ntTSL 517.47■□□□□ 0.398e-6■□□□□ 8
DDX21Q9NR30 GUK1-221ENST00000472939 314 ntTSL 317.27■□□□□ 0.368e-6■□□□□ 8
DDX21Q9NR30 GUK1-229ENST00000485733 345 ntTSL 316.34■□□□□ 0.218e-6■□□□□ 8
DDX21Q9NR30 GUK1-212ENST00000435153 865 ntTSL 316.09■□□□□ 0.178e-6■□□□□ 8
DDX21Q9NR30 AARS-201ENST00000261772 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.182e-9■□□□□ 8
DDX21Q9NR30 CBFA2T3-211ENST00000570046 284 ntTSL 312.58□□□□□ -0.48e-6■□□□□ 8
Retrieved 40 of 1,140 protein–RNA pairs in 10.5 ms