Protein–RNA interactions for Protein: Q9JIH2

Nup50, Nuclear pore complex protein Nup50, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50Q9JIH2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nup50Q9JIH2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Nup50Q9JIH2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Nup50Q9JIH2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Nup50Q9JIH2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Nup50Q9JIH2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Nup50Q9JIH2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Nup50Q9JIH2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.81■■□□□ 1.4
Nup50Q9JIH2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.81■■□□□ 1.4
Nup50Q9JIH2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Nup50Q9JIH2 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nup50Q9JIH2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Nup50Q9JIH2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Nup50Q9JIH2 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nup50Q9JIH2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.79■■□□□ 1.4
Nup50Q9JIH2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nup50Q9JIH2 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.79■■□□□ 1.4
Nup50Q9JIH2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nup50Q9JIH2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Nup50Q9JIH2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.78■■□□□ 1.4
Nup50Q9JIH2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Nup50Q9JIH2 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nup50Q9JIH2 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nup50Q9JIH2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nup50Q9JIH2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Nup50Q9JIH2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Nup50Q9JIH2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Nup50Q9JIH2 Gm9812-201ENSMUST00000061934 968 ntBASIC23.76■■□□□ 1.39
Nup50Q9JIH2 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nup50Q9JIH2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nup50Q9JIH2 Gm4799-201ENSMUST00000095396 657 ntBASIC23.75■■□□□ 1.39
Nup50Q9JIH2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nup50Q9JIH2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Nup50Q9JIH2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
Nup50Q9JIH2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nup50Q9JIH2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nup50Q9JIH2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nup50Q9JIH2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nup50Q9JIH2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nup50Q9JIH2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Nup50Q9JIH2 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nup50Q9JIH2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
Nup50Q9JIH2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nup50Q9JIH2 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Nup50Q9JIH2 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.72■■□□□ 1.39
Nup50Q9JIH2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.72■■□□□ 1.39
Nup50Q9JIH2 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Nup50Q9JIH2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.72■■□□□ 1.39
Nup50Q9JIH2 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Nup50Q9JIH2 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Nup50Q9JIH2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Nup50Q9JIH2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Nup50Q9JIH2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.71■■□□□ 1.39
Nup50Q9JIH2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Nup50Q9JIH2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.71■■□□□ 1.39
Nup50Q9JIH2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Nup50Q9JIH2 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.71■■□□□ 1.39
Nup50Q9JIH2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Nup50Q9JIH2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Nup50Q9JIH2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.7■■□□□ 1.38
Nup50Q9JIH2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Nup50Q9JIH2 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nup50Q9JIH2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.69■■□□□ 1.38
Nup50Q9JIH2 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nup50Q9JIH2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Nup50Q9JIH2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Nup50Q9JIH2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Nup50Q9JIH2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nup50Q9JIH2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Nup50Q9JIH2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Nup50Q9JIH2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Nup50Q9JIH2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Nup50Q9JIH2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC23.68■■□□□ 1.38
Nup50Q9JIH2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.68■■□□□ 1.38
Nup50Q9JIH2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
Nup50Q9JIH2 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.67■■□□□ 1.38
Nup50Q9JIH2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Nup50Q9JIH2 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Nup50Q9JIH2 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.67■■□□□ 1.38
Nup50Q9JIH2 Gm7432-201ENSMUST00000210343 879 ntBASIC23.67■■□□□ 1.38
Nup50Q9JIH2 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.67■■□□□ 1.38
Nup50Q9JIH2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Nup50Q9JIH2 Mir3960-201ENSMUST00000198213 73 ntBASIC23.66■■□□□ 1.38
Nup50Q9JIH2 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.66■■□□□ 1.38
Nup50Q9JIH2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Nup50Q9JIH2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Nup50Q9JIH2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Nup50Q9JIH2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Nup50Q9JIH2 Gm45364-201ENSMUST00000210883 159 ntBASIC23.65■■□□□ 1.38
Nup50Q9JIH2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC23.65■■□□□ 1.38
Nup50Q9JIH2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.38
Nup50Q9JIH2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Nup50Q9JIH2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Nup50Q9JIH2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Nup50Q9JIH2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Nup50Q9JIH2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Nup50Q9JIH2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
Nup50Q9JIH2 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Nup50Q9JIH2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.63■■□□□ 1.37
Nup50Q9JIH2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms