Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ube4bQ9ES00 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ube4bQ9ES00 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Ube4bQ9ES00 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ube4bQ9ES00 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ube4bQ9ES00 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
Ube4bQ9ES00 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ube4bQ9ES00 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.53■■□□□ 1.04
Ube4bQ9ES00 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.53■■□□□ 1.04
Ube4bQ9ES00 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.53■■□□□ 1.04
Ube4bQ9ES00 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ube4bQ9ES00 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ube4bQ9ES00 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ube4bQ9ES00 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ube4bQ9ES00 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
Ube4bQ9ES00 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Ube4bQ9ES00 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ube4bQ9ES00 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ube4bQ9ES00 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ube4bQ9ES00 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ube4bQ9ES00 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ube4bQ9ES00 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.51■■□□□ 1.03
Ube4bQ9ES00 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Ube4bQ9ES00 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Ube4bQ9ES00 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Ube4bQ9ES00 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ube4bQ9ES00 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.5■■□□□ 1.03
Ube4bQ9ES00 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ube4bQ9ES00 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ube4bQ9ES00 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC21.5■■□□□ 1.03
Ube4bQ9ES00 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ube4bQ9ES00 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ube4bQ9ES00 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.5■■□□□ 1.03
Ube4bQ9ES00 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ube4bQ9ES00 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ube4bQ9ES00 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ube4bQ9ES00 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Ube4bQ9ES00 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Ube4bQ9ES00 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.49■■□□□ 1.03
Ube4bQ9ES00 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ube4bQ9ES00 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ube4bQ9ES00 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ube4bQ9ES00 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Ube4bQ9ES00 Zfp131-205ENSMUST00000223812 663 ntBASIC21.47■■□□□ 1.03
Ube4bQ9ES00 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ube4bQ9ES00 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
Ube4bQ9ES00 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ube4bQ9ES00 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ube4bQ9ES00 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ube4bQ9ES00 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ube4bQ9ES00 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Ube4bQ9ES00 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ube4bQ9ES00 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ube4bQ9ES00 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.02
Ube4bQ9ES00 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.45■■□□□ 1.02
Ube4bQ9ES00 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ube4bQ9ES00 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ube4bQ9ES00 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ube4bQ9ES00 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ube4bQ9ES00 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ube4bQ9ES00 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ube4bQ9ES00 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ube4bQ9ES00 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.43■■□□□ 1.02
Ube4bQ9ES00 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ube4bQ9ES00 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ube4bQ9ES00 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ube4bQ9ES00 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ube4bQ9ES00 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.43■■□□□ 1.02
Ube4bQ9ES00 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ube4bQ9ES00 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ube4bQ9ES00 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ube4bQ9ES00 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ube4bQ9ES00 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Ube4bQ9ES00 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.42■■□□□ 1.02
Ube4bQ9ES00 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ube4bQ9ES00 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Ube4bQ9ES00 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Ube4bQ9ES00 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ube4bQ9ES00 Tdp2-203ENSMUST00000223804 1136 ntBASIC21.41■■□□□ 1.02
Ube4bQ9ES00 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Ube4bQ9ES00 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
Ube4bQ9ES00 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Ube4bQ9ES00 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Ube4bQ9ES00 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Ube4bQ9ES00 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ube4bQ9ES00 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Ube4bQ9ES00 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Ube4bQ9ES00 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Ube4bQ9ES00 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC21.39■■□□□ 1.01
Ube4bQ9ES00 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Ube4bQ9ES00 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ube4bQ9ES00 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Ube4bQ9ES00 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ube4bQ9ES00 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ube4bQ9ES00 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Ube4bQ9ES00 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Ube4bQ9ES00 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ube4bQ9ES00 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.37■■□□□ 1.01
Ube4bQ9ES00 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Ube4bQ9ES00 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms