Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim13Q9CYB0 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Trim13Q9CYB0 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trim13Q9CYB0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim13Q9CYB0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim13Q9CYB0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim13Q9CYB0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim13Q9CYB0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim13Q9CYB0 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim13Q9CYB0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim13Q9CYB0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim13Q9CYB0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trim13Q9CYB0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim13Q9CYB0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim13Q9CYB0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim13Q9CYB0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim13Q9CYB0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim13Q9CYB0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim13Q9CYB0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim13Q9CYB0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim13Q9CYB0 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim13Q9CYB0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim13Q9CYB0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim13Q9CYB0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim13Q9CYB0 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trim13Q9CYB0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Trim13Q9CYB0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim13Q9CYB0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Trim13Q9CYB0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim13Q9CYB0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim13Q9CYB0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
Trim13Q9CYB0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim13Q9CYB0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim13Q9CYB0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim13Q9CYB0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim13Q9CYB0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim13Q9CYB0 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim13Q9CYB0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim13Q9CYB0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.62■□□□□ 0.89
Trim13Q9CYB0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim13Q9CYB0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim13Q9CYB0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim13Q9CYB0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim13Q9CYB0 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim13Q9CYB0 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim13Q9CYB0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim13Q9CYB0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim13Q9CYB0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Trim13Q9CYB0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim13Q9CYB0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim13Q9CYB0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim13Q9CYB0 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim13Q9CYB0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim13Q9CYB0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Trim13Q9CYB0 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim13Q9CYB0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim13Q9CYB0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
Trim13Q9CYB0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Trim13Q9CYB0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim13Q9CYB0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim13Q9CYB0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trim13Q9CYB0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim13Q9CYB0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim13Q9CYB0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim13Q9CYB0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim13Q9CYB0 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.58■□□□□ 0.89
Trim13Q9CYB0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trim13Q9CYB0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim13Q9CYB0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim13Q9CYB0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim13Q9CYB0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim13Q9CYB0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Trim13Q9CYB0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim13Q9CYB0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trim13Q9CYB0 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.57■□□□□ 0.88
Trim13Q9CYB0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim13Q9CYB0 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Trim13Q9CYB0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim13Q9CYB0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim13Q9CYB0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Trim13Q9CYB0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Trim13Q9CYB0 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim13Q9CYB0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim13Q9CYB0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim13Q9CYB0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.55■□□□□ 0.88
Trim13Q9CYB0 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim13Q9CYB0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim13Q9CYB0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim13Q9CYB0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim13Q9CYB0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Trim13Q9CYB0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim13Q9CYB0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.54■□□□□ 0.88
Trim13Q9CYB0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim13Q9CYB0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim13Q9CYB0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim13Q9CYB0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim13Q9CYB0 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim13Q9CYB0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim13Q9CYB0 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim13Q9CYB0 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms