Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
Smc3Q9CW03 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Smc3Q9CW03 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Smc3Q9CW03 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Smc3Q9CW03 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Smc3Q9CW03 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Smc3Q9CW03 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
Smc3Q9CW03 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Smc3Q9CW03 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
Smc3Q9CW03 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Smc3Q9CW03 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC26.35■■□□□ 1.81
Smc3Q9CW03 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Smc3Q9CW03 Gm8503-201ENSMUST00000118131 455 ntBASIC26.34■■□□□ 1.81
Smc3Q9CW03 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Smc3Q9CW03 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Smc3Q9CW03 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Smc3Q9CW03 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC26.33■■□□□ 1.81
Smc3Q9CW03 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
Smc3Q9CW03 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Smc3Q9CW03 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC26.33■■□□□ 1.81
Smc3Q9CW03 AC131739.1-201ENSMUST00000221692 1245 ntBASIC26.33■■□□□ 1.81
Smc3Q9CW03 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Smc3Q9CW03 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Smc3Q9CW03 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC26.33■■□□□ 1.81
Smc3Q9CW03 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Smc3Q9CW03 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Smc3Q9CW03 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Smc3Q9CW03 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC26.31■■□□□ 1.8
Smc3Q9CW03 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Smc3Q9CW03 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Smc3Q9CW03 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC26.29■■□□□ 1.8
Smc3Q9CW03 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Smc3Q9CW03 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Smc3Q9CW03 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Smc3Q9CW03 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Smc3Q9CW03 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Smc3Q9CW03 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Smc3Q9CW03 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
Smc3Q9CW03 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Smc3Q9CW03 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
Smc3Q9CW03 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Smc3Q9CW03 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Smc3Q9CW03 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Smc3Q9CW03 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Smc3Q9CW03 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.27■■□□□ 1.8
Smc3Q9CW03 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Smc3Q9CW03 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Smc3Q9CW03 Gm17641-201ENSMUST00000166328 2350 ntBASIC26.27■■□□□ 1.8
Smc3Q9CW03 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC26.26■■□□□ 1.79
Smc3Q9CW03 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Smc3Q9CW03 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Smc3Q9CW03 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
Smc3Q9CW03 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Smc3Q9CW03 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC26.25■■□□□ 1.79
Smc3Q9CW03 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Smc3Q9CW03 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Smc3Q9CW03 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Smc3Q9CW03 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Smc3Q9CW03 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Smc3Q9CW03 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC26.23■■□□□ 1.79
Smc3Q9CW03 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Smc3Q9CW03 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Smc3Q9CW03 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Smc3Q9CW03 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Smc3Q9CW03 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Smc3Q9CW03 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Smc3Q9CW03 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.2■■□□□ 1.78
Smc3Q9CW03 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Smc3Q9CW03 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Smc3Q9CW03 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Smc3Q9CW03 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC26.2■■□□□ 1.78
Smc3Q9CW03 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26.19■■□□□ 1.78
Smc3Q9CW03 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
Smc3Q9CW03 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
Smc3Q9CW03 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Smc3Q9CW03 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Smc3Q9CW03 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Smc3Q9CW03 Gm4799-201ENSMUST00000095396 657 ntBASIC26.18■■□□□ 1.78
Smc3Q9CW03 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Smc3Q9CW03 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Smc3Q9CW03 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.18■■□□□ 1.78
Smc3Q9CW03 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Smc3Q9CW03 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC26.18■■□□□ 1.78
Smc3Q9CW03 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Smc3Q9CW03 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Smc3Q9CW03 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Smc3Q9CW03 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Smc3Q9CW03 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Smc3Q9CW03 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Smc3Q9CW03 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC26.16■■□□□ 1.78
Smc3Q9CW03 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Smc3Q9CW03 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Smc3Q9CW03 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Smc3Q9CW03 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Smc3Q9CW03 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Smc3Q9CW03 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Smc3Q9CW03 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC26.14■■□□□ 1.78
Smc3Q9CW03 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.14■■□□□ 1.78
Smc3Q9CW03 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC26.14■■□□□ 1.77
Smc3Q9CW03 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms