Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61bQ9CQS8 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC12.08□□□□□ -0.48
Sec61bQ9CQS8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61bQ9CQS8 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61bQ9CQS8 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61bQ9CQS8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61bQ9CQS8 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61bQ9CQS8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC12.08□□□□□ -0.48
Sec61bQ9CQS8 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61bQ9CQS8 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Sec61bQ9CQS8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Sec61bQ9CQS8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC12.08□□□□□ -0.48
Sec61bQ9CQS8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61bQ9CQS8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61bQ9CQS8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC12.07□□□□□ -0.48
Sec61bQ9CQS8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61bQ9CQS8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61bQ9CQS8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61bQ9CQS8 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61bQ9CQS8 Gm4419-202ENSMUST00000226239 1431 ntBASIC12.07□□□□□ -0.48
Sec61bQ9CQS8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61bQ9CQS8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC12.07□□□□□ -0.48
Sec61bQ9CQS8 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Sec61bQ9CQS8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61bQ9CQS8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Sec61bQ9CQS8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61bQ9CQS8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61bQ9CQS8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61bQ9CQS8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61bQ9CQS8 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61bQ9CQS8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Sec61bQ9CQS8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Sec61bQ9CQS8 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61bQ9CQS8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61bQ9CQS8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61bQ9CQS8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Sec61bQ9CQS8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61bQ9CQS8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC12.05□□□□□ -0.48
Sec61bQ9CQS8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Sec61bQ9CQS8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC12.04□□□□□ -0.48
Sec61bQ9CQS8 Gm5812-201ENSMUST00000061073 957 ntBASIC12.04□□□□□ -0.48
Sec61bQ9CQS8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Sec61bQ9CQS8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Sec61bQ9CQS8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61bQ9CQS8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61bQ9CQS8 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC12.03□□□□□ -0.48
Sec61bQ9CQS8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61bQ9CQS8 AC117769.4-201ENSMUST00000225679 685 ntBASIC12.03□□□□□ -0.48
Sec61bQ9CQS8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61bQ9CQS8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61bQ9CQS8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61bQ9CQS8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sec61bQ9CQS8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sec61bQ9CQS8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sec61bQ9CQS8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sec61bQ9CQS8 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC12.02□□□□□ -0.49
Sec61bQ9CQS8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Sec61bQ9CQS8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61bQ9CQS8 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61bQ9CQS8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61bQ9CQS8 AC151971.4-201ENSMUST00000214717 704 ntBASIC12.01□□□□□ -0.49
Sec61bQ9CQS8 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61bQ9CQS8 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sec61bQ9CQS8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Sec61bQ9CQS8 Gm15546-201ENSMUST00000122095 826 ntBASIC12□□□□□ -0.49
Sec61bQ9CQS8 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC12□□□□□ -0.49
Sec61bQ9CQS8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61bQ9CQS8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sec61bQ9CQS8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61bQ9CQS8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Sec61bQ9CQS8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC12□□□□□ -0.49
Sec61bQ9CQS8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61bQ9CQS8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC11.99□□□□□ -0.49
Sec61bQ9CQS8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61bQ9CQS8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Sec61bQ9CQS8 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61bQ9CQS8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61bQ9CQS8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sec61bQ9CQS8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Sec61bQ9CQS8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61bQ9CQS8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61bQ9CQS8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC11.98□□□□□ -0.49
Sec61bQ9CQS8 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sec61bQ9CQS8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61bQ9CQS8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sec61bQ9CQS8 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Sec61bQ9CQS8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61bQ9CQS8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sec61bQ9CQS8 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61bQ9CQS8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61bQ9CQS8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC11.97□□□□□ -0.49
Sec61bQ9CQS8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sec61bQ9CQS8 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Sec61bQ9CQS8 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC11.97□□□□□ -0.49
Sec61bQ9CQS8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61bQ9CQS8 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sec61bQ9CQS8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Sec61bQ9CQS8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sec61bQ9CQS8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Sec61bQ9CQS8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 123.1 ms