Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chchd1Q9CQA6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chchd1Q9CQA6 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Chchd1Q9CQA6 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Chchd1Q9CQA6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.13■□□□□ 0.33
Chchd1Q9CQA6 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chchd1Q9CQA6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chchd1Q9CQA6 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Chchd1Q9CQA6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chchd1Q9CQA6 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Chchd1Q9CQA6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Chchd1Q9CQA6 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chchd1Q9CQA6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chchd1Q9CQA6 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Chchd1Q9CQA6 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Chchd1Q9CQA6 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Chchd1Q9CQA6 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chchd1Q9CQA6 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chchd1Q9CQA6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chchd1Q9CQA6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Chchd1Q9CQA6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Chchd1Q9CQA6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Chchd1Q9CQA6 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chchd1Q9CQA6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Chchd1Q9CQA6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chchd1Q9CQA6 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Chchd1Q9CQA6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Chchd1Q9CQA6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chchd1Q9CQA6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC17.09■□□□□ 0.33
Chchd1Q9CQA6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chchd1Q9CQA6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chchd1Q9CQA6 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chchd1Q9CQA6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.09■□□□□ 0.33
Chchd1Q9CQA6 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chchd1Q9CQA6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chchd1Q9CQA6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chchd1Q9CQA6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Chchd1Q9CQA6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chchd1Q9CQA6 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chchd1Q9CQA6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chchd1Q9CQA6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chchd1Q9CQA6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chchd1Q9CQA6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chchd1Q9CQA6 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Chchd1Q9CQA6 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chchd1Q9CQA6 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chchd1Q9CQA6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chchd1Q9CQA6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chchd1Q9CQA6 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.07■□□□□ 0.32
Chchd1Q9CQA6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chchd1Q9CQA6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chchd1Q9CQA6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.06■□□□□ 0.32
Chchd1Q9CQA6 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chchd1Q9CQA6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.06■□□□□ 0.32
Chchd1Q9CQA6 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chchd1Q9CQA6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Chchd1Q9CQA6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chchd1Q9CQA6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Chchd1Q9CQA6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Chchd1Q9CQA6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chchd1Q9CQA6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chchd1Q9CQA6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chchd1Q9CQA6 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chchd1Q9CQA6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chchd1Q9CQA6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Chchd1Q9CQA6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chchd1Q9CQA6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Chchd1Q9CQA6 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chchd1Q9CQA6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chchd1Q9CQA6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Chchd1Q9CQA6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chchd1Q9CQA6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chchd1Q9CQA6 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Chchd1Q9CQA6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chchd1Q9CQA6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.03■□□□□ 0.32
Chchd1Q9CQA6 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chchd1Q9CQA6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Chchd1Q9CQA6 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chchd1Q9CQA6 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chchd1Q9CQA6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chchd1Q9CQA6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chchd1Q9CQA6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Chchd1Q9CQA6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Chchd1Q9CQA6 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Chchd1Q9CQA6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Chchd1Q9CQA6 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Chchd1Q9CQA6 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Chchd1Q9CQA6 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Chchd1Q9CQA6 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Chchd1Q9CQA6 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chchd1Q9CQA6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Chchd1Q9CQA6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Chchd1Q9CQA6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chchd1Q9CQA6 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Chchd1Q9CQA6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC17■□□□□ 0.31
Chchd1Q9CQA6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chchd1Q9CQA6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17■□□□□ 0.31
Chchd1Q9CQA6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Chchd1Q9CQA6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Chchd1Q9CQA6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms