Protein–RNA interactions for Protein: Q99M54

Cdca3, Cell division cycle-associated protein 3, mousemouse

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca3Q99M54 Mir3960-201ENSMUST00000198213 73 ntBASIC20.74■□□□□ 0.91
Cdca3Q99M54 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdca3Q99M54 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdca3Q99M54 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.74■□□□□ 0.91
Cdca3Q99M54 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdca3Q99M54 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdca3Q99M54 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.74■□□□□ 0.91
Cdca3Q99M54 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdca3Q99M54 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdca3Q99M54 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.73■□□□□ 0.91
Cdca3Q99M54 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Cdca3Q99M54 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdca3Q99M54 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdca3Q99M54 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdca3Q99M54 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.71■□□□□ 0.91
Cdca3Q99M54 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Cdca3Q99M54 Gm15039-201ENSMUST00000118914 875 ntBASIC20.71■□□□□ 0.91
Cdca3Q99M54 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cdca3Q99M54 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cdca3Q99M54 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
Cdca3Q99M54 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdca3Q99M54 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdca3Q99M54 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdca3Q99M54 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdca3Q99M54 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdca3Q99M54 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cdca3Q99M54 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdca3Q99M54 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdca3Q99M54 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdca3Q99M54 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdca3Q99M54 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdca3Q99M54 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdca3Q99M54 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdca3Q99M54 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.68■□□□□ 0.9
Cdca3Q99M54 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdca3Q99M54 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdca3Q99M54 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.67■□□□□ 0.9
Cdca3Q99M54 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdca3Q99M54 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Cdca3Q99M54 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdca3Q99M54 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.66■□□□□ 0.9
Cdca3Q99M54 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdca3Q99M54 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdca3Q99M54 Gm45364-201ENSMUST00000210883 159 ntBASIC20.64■□□□□ 0.89
Cdca3Q99M54 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdca3Q99M54 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdca3Q99M54 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdca3Q99M54 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Cdca3Q99M54 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cdca3Q99M54 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdca3Q99M54 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cdca3Q99M54 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cdca3Q99M54 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cdca3Q99M54 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdca3Q99M54 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.62■□□□□ 0.89
Cdca3Q99M54 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cdca3Q99M54 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cdca3Q99M54 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdca3Q99M54 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdca3Q99M54 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdca3Q99M54 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdca3Q99M54 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cdca3Q99M54 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cdca3Q99M54 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cdca3Q99M54 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdca3Q99M54 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cdca3Q99M54 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.61■□□□□ 0.89
Cdca3Q99M54 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdca3Q99M54 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdca3Q99M54 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdca3Q99M54 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cdca3Q99M54 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdca3Q99M54 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Cdca3Q99M54 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdca3Q99M54 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cdca3Q99M54 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.59■□□□□ 0.89
Cdca3Q99M54 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdca3Q99M54 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.59■□□□□ 0.89
Cdca3Q99M54 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdca3Q99M54 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.59■□□□□ 0.89
Cdca3Q99M54 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cdca3Q99M54 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdca3Q99M54 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cdca3Q99M54 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cdca3Q99M54 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cdca3Q99M54 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cdca3Q99M54 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdca3Q99M54 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdca3Q99M54 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Cdca3Q99M54 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cdca3Q99M54 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cdca3Q99M54 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.56■□□□□ 0.88
Cdca3Q99M54 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Cdca3Q99M54 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdca3Q99M54 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cdca3Q99M54 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdca3Q99M54 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.55■□□□□ 0.88
Cdca3Q99M54 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdca3Q99M54 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cdca3Q99M54 Gm14523-201ENSMUST00000117260 558 ntBASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms