Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Ddx39aQ8VDW0 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ddx39aQ8VDW0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Ddx39aQ8VDW0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ddx39aQ8VDW0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ddx39aQ8VDW0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Ddx39aQ8VDW0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Ddx39aQ8VDW0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Ddx39aQ8VDW0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Ddx39aQ8VDW0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ddx39aQ8VDW0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC25.13■■□□□ 1.61
Ddx39aQ8VDW0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC25.13■■□□□ 1.61
Ddx39aQ8VDW0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ddx39aQ8VDW0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ddx39aQ8VDW0 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ddx39aQ8VDW0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Ddx39aQ8VDW0 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25.13■■□□□ 1.61
Ddx39aQ8VDW0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ddx39aQ8VDW0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ddx39aQ8VDW0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Ddx39aQ8VDW0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ddx39aQ8VDW0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ddx39aQ8VDW0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ddx39aQ8VDW0 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Ddx39aQ8VDW0 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ddx39aQ8VDW0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Ddx39aQ8VDW0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Ddx39aQ8VDW0 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
Ddx39aQ8VDW0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Ddx39aQ8VDW0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.09■■□□□ 1.61
Ddx39aQ8VDW0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ddx39aQ8VDW0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Ddx39aQ8VDW0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC25.08■■□□□ 1.6
Ddx39aQ8VDW0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Ddx39aQ8VDW0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC25.07■■□□□ 1.6
Ddx39aQ8VDW0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ddx39aQ8VDW0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Ddx39aQ8VDW0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx39aQ8VDW0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC25.05■■□□□ 1.6
Ddx39aQ8VDW0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx39aQ8VDW0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC25.04■■□□□ 1.6
Ddx39aQ8VDW0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Ddx39aQ8VDW0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx39aQ8VDW0 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC25.04■■□□□ 1.6
Ddx39aQ8VDW0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC25.03■■□□□ 1.6
Ddx39aQ8VDW0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Ddx39aQ8VDW0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ddx39aQ8VDW0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ddx39aQ8VDW0 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ddx39aQ8VDW0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ddx39aQ8VDW0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ddx39aQ8VDW0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Ddx39aQ8VDW0 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC25.01■■□□□ 1.59
Ddx39aQ8VDW0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx39aQ8VDW0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ddx39aQ8VDW0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
Ddx39aQ8VDW0 AC117769.4-201ENSMUST00000225679 685 ntBASIC25.01■■□□□ 1.59
Ddx39aQ8VDW0 Gm5921-201ENSMUST00000075898 882 ntBASIC25.01■■□□□ 1.59
Ddx39aQ8VDW0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Ddx39aQ8VDW0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC25■■□□□ 1.59
Ddx39aQ8VDW0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC25■■□□□ 1.59
Ddx39aQ8VDW0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ddx39aQ8VDW0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ddx39aQ8VDW0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx39aQ8VDW0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
Ddx39aQ8VDW0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx39aQ8VDW0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx39aQ8VDW0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx39aQ8VDW0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx39aQ8VDW0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx39aQ8VDW0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
Ddx39aQ8VDW0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx39aQ8VDW0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx39aQ8VDW0 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
Ddx39aQ8VDW0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx39aQ8VDW0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.95■■□□□ 1.59
Ddx39aQ8VDW0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC24.95■■□□□ 1.58
Ddx39aQ8VDW0 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Ddx39aQ8VDW0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ddx39aQ8VDW0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ddx39aQ8VDW0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ddx39aQ8VDW0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Ddx39aQ8VDW0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ddx39aQ8VDW0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ddx39aQ8VDW0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ddx39aQ8VDW0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ddx39aQ8VDW0 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Ddx39aQ8VDW0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Ddx39aQ8VDW0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ddx39aQ8VDW0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
Ddx39aQ8VDW0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ddx39aQ8VDW0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.9■■□□□ 1.58
Ddx39aQ8VDW0 Gm43592-201ENSMUST00000196922 1165 ntBASIC24.89■■□□□ 1.58
Ddx39aQ8VDW0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Ddx39aQ8VDW0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Ddx39aQ8VDW0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Ddx39aQ8VDW0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ddx39aQ8VDW0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ddx39aQ8VDW0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Ddx39aQ8VDW0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms