Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Lsm1Q8VC85 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Lsm1Q8VC85 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lsm1Q8VC85 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.56■■□□□ 1.04
Lsm1Q8VC85 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Lsm1Q8VC85 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lsm1Q8VC85 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Lsm1Q8VC85 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lsm1Q8VC85 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lsm1Q8VC85 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lsm1Q8VC85 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.54■■□□□ 1.04
Lsm1Q8VC85 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Lsm1Q8VC85 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Lsm1Q8VC85 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.54■■□□□ 1.04
Lsm1Q8VC85 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Lsm1Q8VC85 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lsm1Q8VC85 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Lsm1Q8VC85 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Lsm1Q8VC85 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Lsm1Q8VC85 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lsm1Q8VC85 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.51■■□□□ 1.03
Lsm1Q8VC85 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Lsm1Q8VC85 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lsm1Q8VC85 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
Lsm1Q8VC85 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.5■■□□□ 1.03
Lsm1Q8VC85 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Lsm1Q8VC85 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lsm1Q8VC85 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lsm1Q8VC85 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lsm1Q8VC85 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lsm1Q8VC85 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.49■■□□□ 1.03
Lsm1Q8VC85 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lsm1Q8VC85 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm1Q8VC85 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm1Q8VC85 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Lsm1Q8VC85 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm1Q8VC85 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm1Q8VC85 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm1Q8VC85 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm1Q8VC85 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Lsm1Q8VC85 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Lsm1Q8VC85 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.47■■□□□ 1.03
Lsm1Q8VC85 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.47■■□□□ 1.03
Lsm1Q8VC85 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Lsm1Q8VC85 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Lsm1Q8VC85 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsm1Q8VC85 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsm1Q8VC85 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Lsm1Q8VC85 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Lsm1Q8VC85 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Lsm1Q8VC85 Gm4799-201ENSMUST00000095396 657 ntBASIC21.45■■□□□ 1.02
Lsm1Q8VC85 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lsm1Q8VC85 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Lsm1Q8VC85 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Lsm1Q8VC85 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm1Q8VC85 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Lsm1Q8VC85 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm1Q8VC85 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm1Q8VC85 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm1Q8VC85 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Lsm1Q8VC85 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lsm1Q8VC85 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
Lsm1Q8VC85 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lsm1Q8VC85 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Lsm1Q8VC85 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.43■■□□□ 1.02
Lsm1Q8VC85 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Lsm1Q8VC85 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.43■■□□□ 1.02
Lsm1Q8VC85 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm1Q8VC85 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm1Q8VC85 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.42■■□□□ 1.02
Lsm1Q8VC85 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.42■■□□□ 1.02
Lsm1Q8VC85 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.42■■□□□ 1.02
Lsm1Q8VC85 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm1Q8VC85 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lsm1Q8VC85 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Lsm1Q8VC85 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm1Q8VC85 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.41■■□□□ 1.02
Lsm1Q8VC85 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Lsm1Q8VC85 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
Lsm1Q8VC85 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm1Q8VC85 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm1Q8VC85 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm1Q8VC85 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lsm1Q8VC85 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm1Q8VC85 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.4■■□□□ 1.02
Lsm1Q8VC85 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Lsm1Q8VC85 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm1Q8VC85 Gm9812-201ENSMUST00000061934 968 ntBASIC21.4■■□□□ 1.02
Lsm1Q8VC85 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm1Q8VC85 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm1Q8VC85 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm1Q8VC85 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lsm1Q8VC85 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.4■■□□□ 1.02
Lsm1Q8VC85 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Lsm1Q8VC85 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Lsm1Q8VC85 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Lsm1Q8VC85 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lsm1Q8VC85 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Lsm1Q8VC85 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Lsm1Q8VC85 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms