Protein–RNA interactions for Protein: Q8R1S9

Slc38a4, Sodium-coupled neutral amino acid transporter 4, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc38a4Q8R1S9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc38a4Q8R1S9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Slc38a4Q8R1S9 Gm11599-201ENSMUST00000118720 878 ntBASIC21.25■□□□□ 0.99
Slc38a4Q8R1S9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Slc38a4Q8R1S9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc38a4Q8R1S9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Slc38a4Q8R1S9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc38a4Q8R1S9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Slc38a4Q8R1S9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc38a4Q8R1S9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Slc38a4Q8R1S9 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc38a4Q8R1S9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc38a4Q8R1S9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc38a4Q8R1S9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Slc38a4Q8R1S9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Slc38a4Q8R1S9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Slc38a4Q8R1S9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Slc38a4Q8R1S9 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Slc38a4Q8R1S9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Slc38a4Q8R1S9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc38a4Q8R1S9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc38a4Q8R1S9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.21■□□□□ 0.99
Slc38a4Q8R1S9 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Slc38a4Q8R1S9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Slc38a4Q8R1S9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Slc38a4Q8R1S9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.21■□□□□ 0.99
Slc38a4Q8R1S9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Slc38a4Q8R1S9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Slc38a4Q8R1S9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Slc38a4Q8R1S9 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.21■□□□□ 0.99
Slc38a4Q8R1S9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc38a4Q8R1S9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Slc38a4Q8R1S9 Gm4799-201ENSMUST00000095396 657 ntBASIC21.2■□□□□ 0.98
Slc38a4Q8R1S9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Slc38a4Q8R1S9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slc38a4Q8R1S9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slc38a4Q8R1S9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc38a4Q8R1S9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Slc38a4Q8R1S9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Slc38a4Q8R1S9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Slc38a4Q8R1S9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc38a4Q8R1S9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Slc38a4Q8R1S9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Slc38a4Q8R1S9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.18■□□□□ 0.98
Slc38a4Q8R1S9 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc38a4Q8R1S9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc38a4Q8R1S9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Slc38a4Q8R1S9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.17■□□□□ 0.98
Slc38a4Q8R1S9 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
Slc38a4Q8R1S9 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc38a4Q8R1S9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc38a4Q8R1S9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc38a4Q8R1S9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Slc38a4Q8R1S9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Slc38a4Q8R1S9 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Slc38a4Q8R1S9 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Slc38a4Q8R1S9 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Slc38a4Q8R1S9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.16■□□□□ 0.98
Slc38a4Q8R1S9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.15■□□□□ 0.98
Slc38a4Q8R1S9 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.15■□□□□ 0.98
Slc38a4Q8R1S9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.15■□□□□ 0.98
Slc38a4Q8R1S9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Slc38a4Q8R1S9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Slc38a4Q8R1S9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Slc38a4Q8R1S9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.15■□□□□ 0.98
Slc38a4Q8R1S9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc38a4Q8R1S9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc38a4Q8R1S9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Slc38a4Q8R1S9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Slc38a4Q8R1S9 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Slc38a4Q8R1S9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Slc38a4Q8R1S9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Slc38a4Q8R1S9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.14■□□□□ 0.97
Slc38a4Q8R1S9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Slc38a4Q8R1S9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc38a4Q8R1S9 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Slc38a4Q8R1S9 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Slc38a4Q8R1S9 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Slc38a4Q8R1S9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Slc38a4Q8R1S9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc38a4Q8R1S9 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc38a4Q8R1S9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Slc38a4Q8R1S9 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Slc38a4Q8R1S9 Mir3960-201ENSMUST00000198213 73 ntBASIC21.1■□□□□ 0.97
Slc38a4Q8R1S9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Slc38a4Q8R1S9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc38a4Q8R1S9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc38a4Q8R1S9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc38a4Q8R1S9 Gm9812-201ENSMUST00000061934 968 ntBASIC21.09■□□□□ 0.97
Slc38a4Q8R1S9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc38a4Q8R1S9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc38a4Q8R1S9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc38a4Q8R1S9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Slc38a4Q8R1S9 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Slc38a4Q8R1S9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Slc38a4Q8R1S9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
Slc38a4Q8R1S9 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.08■□□□□ 0.97
Slc38a4Q8R1S9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Slc38a4Q8R1S9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Slc38a4Q8R1S9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms