Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Pcdhb7Q8CDY9 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Pcdhb7Q8CDY9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Pcdhb7Q8CDY9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.42■■□□□ 1.18
Pcdhb7Q8CDY9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.42■■□□□ 1.18
Pcdhb7Q8CDY9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Pcdhb7Q8CDY9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Pcdhb7Q8CDY9 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Pcdhb7Q8CDY9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.39■■□□□ 1.18
Pcdhb7Q8CDY9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Pcdhb7Q8CDY9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
Pcdhb7Q8CDY9 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.38■■□□□ 1.17
Pcdhb7Q8CDY9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb7Q8CDY9 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.38■■□□□ 1.17
Pcdhb7Q8CDY9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb7Q8CDY9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Pcdhb7Q8CDY9 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb7Q8CDY9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.37■■□□□ 1.17
Pcdhb7Q8CDY9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Pcdhb7Q8CDY9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Pcdhb7Q8CDY9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Pcdhb7Q8CDY9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Pcdhb7Q8CDY9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Pcdhb7Q8CDY9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Pcdhb7Q8CDY9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.36■■□□□ 1.17
Pcdhb7Q8CDY9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.36■■□□□ 1.17
Pcdhb7Q8CDY9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
Pcdhb7Q8CDY9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Pcdhb7Q8CDY9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb7Q8CDY9 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb7Q8CDY9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Pcdhb7Q8CDY9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb7Q8CDY9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Pcdhb7Q8CDY9 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Pcdhb7Q8CDY9 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb7Q8CDY9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb7Q8CDY9 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb7Q8CDY9 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb7Q8CDY9 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb7Q8CDY9 Mir3960-201ENSMUST00000198213 73 ntBASIC22.33■■□□□ 1.17
Pcdhb7Q8CDY9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb7Q8CDY9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Pcdhb7Q8CDY9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.32■■□□□ 1.16
Pcdhb7Q8CDY9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb7Q8CDY9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Pcdhb7Q8CDY9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pcdhb7Q8CDY9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
Pcdhb7Q8CDY9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb7Q8CDY9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Pcdhb7Q8CDY9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb7Q8CDY9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb7Q8CDY9 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Pcdhb7Q8CDY9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pcdhb7Q8CDY9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
Pcdhb7Q8CDY9 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Pcdhb7Q8CDY9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC22.3■■□□□ 1.16
Pcdhb7Q8CDY9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Pcdhb7Q8CDY9 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb7Q8CDY9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Pcdhb7Q8CDY9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.3■■□□□ 1.16
Pcdhb7Q8CDY9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb7Q8CDY9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Pcdhb7Q8CDY9 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.29■■□□□ 1.16
Pcdhb7Q8CDY9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb7Q8CDY9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb7Q8CDY9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pcdhb7Q8CDY9 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb7Q8CDY9 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb7Q8CDY9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb7Q8CDY9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb7Q8CDY9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb7Q8CDY9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pcdhb7Q8CDY9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb7Q8CDY9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pcdhb7Q8CDY9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Pcdhb7Q8CDY9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb7Q8CDY9 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb7Q8CDY9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pcdhb7Q8CDY9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.26■■□□□ 1.15
Pcdhb7Q8CDY9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.24■■□□□ 1.15
Pcdhb7Q8CDY9 Gm9812-201ENSMUST00000061934 968 ntBASIC22.24■■□□□ 1.15
Pcdhb7Q8CDY9 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.24■■□□□ 1.15
Pcdhb7Q8CDY9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb7Q8CDY9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pcdhb7Q8CDY9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb7Q8CDY9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Pcdhb7Q8CDY9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb7Q8CDY9 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pcdhb7Q8CDY9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Pcdhb7Q8CDY9 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms