Protein–RNA interactions for Protein: Q8CDE2

Ccin, Calicin, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcinQ8CDE2 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CcinQ8CDE2 Gm15820-201ENSMUST00000201566 728 ntBASIC22.72■■□□□ 1.23
CcinQ8CDE2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
CcinQ8CDE2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.72■■□□□ 1.23
CcinQ8CDE2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
CcinQ8CDE2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
CcinQ8CDE2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CcinQ8CDE2 Rps24-207ENSMUST00000224568 714 ntBASIC22.7■■□□□ 1.22
CcinQ8CDE2 AC117769.4-201ENSMUST00000225679 685 ntBASIC22.7■■□□□ 1.22
CcinQ8CDE2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CcinQ8CDE2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CcinQ8CDE2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
CcinQ8CDE2 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
CcinQ8CDE2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CcinQ8CDE2 Amer2-203ENSMUST00000225247 2662 ntBASIC22.67■■□□□ 1.22
CcinQ8CDE2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CcinQ8CDE2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.66■■□□□ 1.22
CcinQ8CDE2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.66■■□□□ 1.22
CcinQ8CDE2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.66■■□□□ 1.22
CcinQ8CDE2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.66■■□□□ 1.22
CcinQ8CDE2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.65■■□□□ 1.22
CcinQ8CDE2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CcinQ8CDE2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CcinQ8CDE2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CcinQ8CDE2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.65■■□□□ 1.22
CcinQ8CDE2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC22.65■■□□□ 1.22
CcinQ8CDE2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CcinQ8CDE2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CcinQ8CDE2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CcinQ8CDE2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CcinQ8CDE2 Gm45102-201ENSMUST00000207427 857 ntBASIC22.63■■□□□ 1.21
CcinQ8CDE2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CcinQ8CDE2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.63■■□□□ 1.21
CcinQ8CDE2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CcinQ8CDE2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CcinQ8CDE2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CcinQ8CDE2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CcinQ8CDE2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC22.62■■□□□ 1.21
CcinQ8CDE2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CcinQ8CDE2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.62■■□□□ 1.21
CcinQ8CDE2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.62■■□□□ 1.21
CcinQ8CDE2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CcinQ8CDE2 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
CcinQ8CDE2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CcinQ8CDE2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CcinQ8CDE2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CcinQ8CDE2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CcinQ8CDE2 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
CcinQ8CDE2 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CcinQ8CDE2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CcinQ8CDE2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
CcinQ8CDE2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CcinQ8CDE2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CcinQ8CDE2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.58■■□□□ 1.21
CcinQ8CDE2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
CcinQ8CDE2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CcinQ8CDE2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.58■■□□□ 1.21
CcinQ8CDE2 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CcinQ8CDE2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CcinQ8CDE2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CcinQ8CDE2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CcinQ8CDE2 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CcinQ8CDE2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
CcinQ8CDE2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CcinQ8CDE2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CcinQ8CDE2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
CcinQ8CDE2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CcinQ8CDE2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
CcinQ8CDE2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
CcinQ8CDE2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CcinQ8CDE2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.55■■□□□ 1.2
CcinQ8CDE2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CcinQ8CDE2 Gm14117-201ENSMUST00000122417 843 ntBASIC22.55■■□□□ 1.2
CcinQ8CDE2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.55■■□□□ 1.2
CcinQ8CDE2 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.55■■□□□ 1.2
CcinQ8CDE2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CcinQ8CDE2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CcinQ8CDE2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CcinQ8CDE2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CcinQ8CDE2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC22.54■■□□□ 1.2
CcinQ8CDE2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CcinQ8CDE2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CcinQ8CDE2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CcinQ8CDE2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CcinQ8CDE2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CcinQ8CDE2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CcinQ8CDE2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CcinQ8CDE2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.53■■□□□ 1.2
CcinQ8CDE2 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CcinQ8CDE2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CcinQ8CDE2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
CcinQ8CDE2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
CcinQ8CDE2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CcinQ8CDE2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
CcinQ8CDE2 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.5■■□□□ 1.19
CcinQ8CDE2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
CcinQ8CDE2 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CcinQ8CDE2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CcinQ8CDE2 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CcinQ8CDE2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.49■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms