Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Tsen54Q8C2A2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tsen54Q8C2A2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tsen54Q8C2A2 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tsen54Q8C2A2 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tsen54Q8C2A2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tsen54Q8C2A2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tsen54Q8C2A2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tsen54Q8C2A2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tsen54Q8C2A2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tsen54Q8C2A2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.71■□□□□ 0.59
Tsen54Q8C2A2 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tsen54Q8C2A2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Tsen54Q8C2A2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tsen54Q8C2A2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tsen54Q8C2A2 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.7■□□□□ 0.58
Tsen54Q8C2A2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Tsen54Q8C2A2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tsen54Q8C2A2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tsen54Q8C2A2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tsen54Q8C2A2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tsen54Q8C2A2 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.69■□□□□ 0.58
Tsen54Q8C2A2 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Tsen54Q8C2A2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tsen54Q8C2A2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tsen54Q8C2A2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tsen54Q8C2A2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tsen54Q8C2A2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tsen54Q8C2A2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tsen54Q8C2A2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Tsen54Q8C2A2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tsen54Q8C2A2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Tsen54Q8C2A2 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Tsen54Q8C2A2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Tsen54Q8C2A2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Tsen54Q8C2A2 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tsen54Q8C2A2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.66■□□□□ 0.58
Tsen54Q8C2A2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Tsen54Q8C2A2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Tsen54Q8C2A2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Tsen54Q8C2A2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.66■□□□□ 0.58
Tsen54Q8C2A2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Tsen54Q8C2A2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tsen54Q8C2A2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tsen54Q8C2A2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tsen54Q8C2A2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tsen54Q8C2A2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tsen54Q8C2A2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tsen54Q8C2A2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.64■□□□□ 0.58
Tsen54Q8C2A2 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tsen54Q8C2A2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tsen54Q8C2A2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.64■□□□□ 0.57
Tsen54Q8C2A2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Tsen54Q8C2A2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tsen54Q8C2A2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tsen54Q8C2A2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tsen54Q8C2A2 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tsen54Q8C2A2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tsen54Q8C2A2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tsen54Q8C2A2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tsen54Q8C2A2 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.63■□□□□ 0.57
Tsen54Q8C2A2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tsen54Q8C2A2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Tsen54Q8C2A2 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
Tsen54Q8C2A2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tsen54Q8C2A2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tsen54Q8C2A2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tsen54Q8C2A2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.61■□□□□ 0.57
Tsen54Q8C2A2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tsen54Q8C2A2 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.61■□□□□ 0.57
Tsen54Q8C2A2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tsen54Q8C2A2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tsen54Q8C2A2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tsen54Q8C2A2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC18.6■□□□□ 0.57
Tsen54Q8C2A2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tsen54Q8C2A2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tsen54Q8C2A2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tsen54Q8C2A2 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tsen54Q8C2A2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tsen54Q8C2A2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tsen54Q8C2A2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tsen54Q8C2A2 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Tsen54Q8C2A2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tsen54Q8C2A2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tsen54Q8C2A2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tsen54Q8C2A2 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tsen54Q8C2A2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tsen54Q8C2A2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Tsen54Q8C2A2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tsen54Q8C2A2 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Tsen54Q8C2A2 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Tsen54Q8C2A2 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tsen54Q8C2A2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tsen54Q8C2A2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tsen54Q8C2A2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tsen54Q8C2A2 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tsen54Q8C2A2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tsen54Q8C2A2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tsen54Q8C2A2 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Tsen54Q8C2A2 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms