Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.43■■□□□ 1.34
Sh3rf3Q8C120 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Sh3rf3Q8C120 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Sh3rf3Q8C120 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.43■■□□□ 1.34
Sh3rf3Q8C120 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.42■■□□□ 1.34
Sh3rf3Q8C120 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Sh3rf3Q8C120 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Sh3rf3Q8C120 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Sh3rf3Q8C120 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.41■■□□□ 1.34
Sh3rf3Q8C120 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Sh3rf3Q8C120 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Sh3rf3Q8C120 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.4■■□□□ 1.34
Sh3rf3Q8C120 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Sh3rf3Q8C120 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Sh3rf3Q8C120 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
Sh3rf3Q8C120 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Sh3rf3Q8C120 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sh3rf3Q8C120 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sh3rf3Q8C120 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Sh3rf3Q8C120 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Sh3rf3Q8C120 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.38■■□□□ 1.33
Sh3rf3Q8C120 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3rf3Q8C120 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.37■■□□□ 1.33
Sh3rf3Q8C120 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.37■■□□□ 1.33
Sh3rf3Q8C120 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.37■■□□□ 1.33
Sh3rf3Q8C120 Gm6311-201ENSMUST00000073790 878 ntBASIC23.37■■□□□ 1.33
Sh3rf3Q8C120 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3rf3Q8C120 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Sh3rf3Q8C120 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.36■■□□□ 1.33
Sh3rf3Q8C120 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.36■■□□□ 1.33
Sh3rf3Q8C120 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Sh3rf3Q8C120 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Sh3rf3Q8C120 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Sh3rf3Q8C120 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Sh3rf3Q8C120 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sh3rf3Q8C120 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sh3rf3Q8C120 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC23.34■■□□□ 1.33
Sh3rf3Q8C120 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sh3rf3Q8C120 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sh3rf3Q8C120 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sh3rf3Q8C120 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.34■■□□□ 1.33
Sh3rf3Q8C120 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Sh3rf3Q8C120 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sh3rf3Q8C120 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.33■■□□□ 1.33
Sh3rf3Q8C120 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sh3rf3Q8C120 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Sh3rf3Q8C120 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Sh3rf3Q8C120 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sh3rf3Q8C120 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Sh3rf3Q8C120 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
Sh3rf3Q8C120 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.32■■□□□ 1.32
Sh3rf3Q8C120 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Sh3rf3Q8C120 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sh3rf3Q8C120 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Sh3rf3Q8C120 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sh3rf3Q8C120 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sh3rf3Q8C120 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sh3rf3Q8C120 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sh3rf3Q8C120 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sh3rf3Q8C120 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.3■■□□□ 1.32
Sh3rf3Q8C120 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sh3rf3Q8C120 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Sh3rf3Q8C120 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sh3rf3Q8C120 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sh3rf3Q8C120 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Sh3rf3Q8C120 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.29■■□□□ 1.32
Sh3rf3Q8C120 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Sh3rf3Q8C120 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Sh3rf3Q8C120 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sh3rf3Q8C120 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC23.29■■□□□ 1.32
Sh3rf3Q8C120 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sh3rf3Q8C120 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sh3rf3Q8C120 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Sh3rf3Q8C120 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sh3rf3Q8C120 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sh3rf3Q8C120 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.28■■□□□ 1.32
Sh3rf3Q8C120 Terc-201ENSMUST00000082862 423 ntBASIC23.28■■□□□ 1.32
Sh3rf3Q8C120 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Sh3rf3Q8C120 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Sh3rf3Q8C120 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sh3rf3Q8C120 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.28■■□□□ 1.32
Sh3rf3Q8C120 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3rf3Q8C120 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3rf3Q8C120 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3rf3Q8C120 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3rf3Q8C120 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
Sh3rf3Q8C120 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
Sh3rf3Q8C120 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3rf3Q8C120 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3rf3Q8C120 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3rf3Q8C120 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.27■■□□□ 1.32
Sh3rf3Q8C120 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Sh3rf3Q8C120 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sh3rf3Q8C120 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Sh3rf3Q8C120 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.26■■□□□ 1.31
Sh3rf3Q8C120 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sh3rf3Q8C120 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sh3rf3Q8C120 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sh3rf3Q8C120 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Sh3rf3Q8C120 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms