Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cpsf4Q8BQZ5 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cpsf4Q8BQZ5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cpsf4Q8BQZ5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cpsf4Q8BQZ5 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cpsf4Q8BQZ5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cpsf4Q8BQZ5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Cpsf4Q8BQZ5 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cpsf4Q8BQZ5 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cpsf4Q8BQZ5 Gm45364-201ENSMUST00000210883 159 ntBASIC21.64■■□□□ 1.05
Cpsf4Q8BQZ5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.64■■□□□ 1.05
Cpsf4Q8BQZ5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf4Q8BQZ5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf4Q8BQZ5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf4Q8BQZ5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf4Q8BQZ5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf4Q8BQZ5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cpsf4Q8BQZ5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf4Q8BQZ5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf4Q8BQZ5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf4Q8BQZ5 Mir3960-201ENSMUST00000198213 73 ntBASIC21.62■■□□□ 1.05
Cpsf4Q8BQZ5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.62■■□□□ 1.05
Cpsf4Q8BQZ5 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf4Q8BQZ5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.62■■□□□ 1.05
Cpsf4Q8BQZ5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cpsf4Q8BQZ5 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.61■■□□□ 1.05
Cpsf4Q8BQZ5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf4Q8BQZ5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cpsf4Q8BQZ5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Cpsf4Q8BQZ5 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.6■■□□□ 1.05
Cpsf4Q8BQZ5 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf4Q8BQZ5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Cpsf4Q8BQZ5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf4Q8BQZ5 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf4Q8BQZ5 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cpsf4Q8BQZ5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf4Q8BQZ5 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf4Q8BQZ5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf4Q8BQZ5 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf4Q8BQZ5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf4Q8BQZ5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cpsf4Q8BQZ5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cpsf4Q8BQZ5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cpsf4Q8BQZ5 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cpsf4Q8BQZ5 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.57■■□□□ 1.04
Cpsf4Q8BQZ5 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cpsf4Q8BQZ5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.57■■□□□ 1.04
Cpsf4Q8BQZ5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cpsf4Q8BQZ5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf4Q8BQZ5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.56■■□□□ 1.04
Cpsf4Q8BQZ5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf4Q8BQZ5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cpsf4Q8BQZ5 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.55■■□□□ 1.04
Cpsf4Q8BQZ5 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf4Q8BQZ5 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf4Q8BQZ5 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.55■■□□□ 1.04
Cpsf4Q8BQZ5 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf4Q8BQZ5 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf4Q8BQZ5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cpsf4Q8BQZ5 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cpsf4Q8BQZ5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cpsf4Q8BQZ5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.54■■□□□ 1.04
Cpsf4Q8BQZ5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Cpsf4Q8BQZ5 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cpsf4Q8BQZ5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf4Q8BQZ5 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.53■■□□□ 1.04
Cpsf4Q8BQZ5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf4Q8BQZ5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf4Q8BQZ5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf4Q8BQZ5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf4Q8BQZ5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cpsf4Q8BQZ5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cpsf4Q8BQZ5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cpsf4Q8BQZ5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cpsf4Q8BQZ5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cpsf4Q8BQZ5 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.52■■□□□ 1.03
Cpsf4Q8BQZ5 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cpsf4Q8BQZ5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cpsf4Q8BQZ5 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cpsf4Q8BQZ5 Scarna2-201ENSMUST00000157560 414 ntBASIC21.51■■□□□ 1.03
Cpsf4Q8BQZ5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.51■■□□□ 1.03
Cpsf4Q8BQZ5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Cpsf4Q8BQZ5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cpsf4Q8BQZ5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cpsf4Q8BQZ5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cpsf4Q8BQZ5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cpsf4Q8BQZ5 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.5■■□□□ 1.03
Cpsf4Q8BQZ5 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cpsf4Q8BQZ5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cpsf4Q8BQZ5 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cpsf4Q8BQZ5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cpsf4Q8BQZ5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cpsf4Q8BQZ5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.49■■□□□ 1.03
Cpsf4Q8BQZ5 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.49■■□□□ 1.03
Cpsf4Q8BQZ5 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cpsf4Q8BQZ5 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Cpsf4Q8BQZ5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.48■■□□□ 1.03
Cpsf4Q8BQZ5 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.48■■□□□ 1.03
Cpsf4Q8BQZ5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cpsf4Q8BQZ5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms