Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Smg1Q8BKX6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
Smg1Q8BKX6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.63■□□□□ 0.73
Smg1Q8BKX6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smg1Q8BKX6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smg1Q8BKX6 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Smg1Q8BKX6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Smg1Q8BKX6 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Smg1Q8BKX6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.6■□□□□ 0.73
Smg1Q8BKX6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smg1Q8BKX6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smg1Q8BKX6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Smg1Q8BKX6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smg1Q8BKX6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Smg1Q8BKX6 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.59■□□□□ 0.73
Smg1Q8BKX6 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smg1Q8BKX6 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smg1Q8BKX6 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.59■□□□□ 0.73
Smg1Q8BKX6 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Smg1Q8BKX6 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Smg1Q8BKX6 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Smg1Q8BKX6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Smg1Q8BKX6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smg1Q8BKX6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
Smg1Q8BKX6 Gm21956-201ENSMUST00000179946 522 ntBASIC19.57■□□□□ 0.72
Smg1Q8BKX6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.57■□□□□ 0.72
Smg1Q8BKX6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Smg1Q8BKX6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smg1Q8BKX6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Smg1Q8BKX6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smg1Q8BKX6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smg1Q8BKX6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smg1Q8BKX6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smg1Q8BKX6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.54■□□□□ 0.72
Smg1Q8BKX6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.54■□□□□ 0.72
Smg1Q8BKX6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smg1Q8BKX6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Smg1Q8BKX6 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.53■□□□□ 0.72
Smg1Q8BKX6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Smg1Q8BKX6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smg1Q8BKX6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smg1Q8BKX6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smg1Q8BKX6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Smg1Q8BKX6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smg1Q8BKX6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.5■□□□□ 0.71
Smg1Q8BKX6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smg1Q8BKX6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smg1Q8BKX6 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Smg1Q8BKX6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.5■□□□□ 0.71
Smg1Q8BKX6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smg1Q8BKX6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smg1Q8BKX6 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smg1Q8BKX6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smg1Q8BKX6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smg1Q8BKX6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.49■□□□□ 0.71
Smg1Q8BKX6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smg1Q8BKX6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smg1Q8BKX6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Smg1Q8BKX6 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smg1Q8BKX6 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.48■□□□□ 0.71
Smg1Q8BKX6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smg1Q8BKX6 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.48■□□□□ 0.71
Smg1Q8BKX6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Smg1Q8BKX6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smg1Q8BKX6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smg1Q8BKX6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smg1Q8BKX6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smg1Q8BKX6 Gm13241-201ENSMUST00000094493 780 ntBASIC19.47■□□□□ 0.71
Smg1Q8BKX6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smg1Q8BKX6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Smg1Q8BKX6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smg1Q8BKX6 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Smg1Q8BKX6 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.47■□□□□ 0.71
Smg1Q8BKX6 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smg1Q8BKX6 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smg1Q8BKX6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.46■□□□□ 0.71
Smg1Q8BKX6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smg1Q8BKX6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smg1Q8BKX6 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.45■□□□□ 0.7
Smg1Q8BKX6 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.45■□□□□ 0.7
Smg1Q8BKX6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Smg1Q8BKX6 Gm10232-201ENSMUST00000089221 720 ntBASIC19.45■□□□□ 0.7
Smg1Q8BKX6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Smg1Q8BKX6 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Smg1Q8BKX6 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smg1Q8BKX6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smg1Q8BKX6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smg1Q8BKX6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Smg1Q8BKX6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Smg1Q8BKX6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.43■□□□□ 0.7
Smg1Q8BKX6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smg1Q8BKX6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smg1Q8BKX6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.43■□□□□ 0.7
Smg1Q8BKX6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Smg1Q8BKX6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Smg1Q8BKX6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Smg1Q8BKX6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Smg1Q8BKX6 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Smg1Q8BKX6 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.42■□□□□ 0.7
Smg1Q8BKX6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 106.8 ms