Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.97■■□□□ 1.43
Usp1Q8BJQ2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Usp1Q8BJQ2 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Usp1Q8BJQ2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Usp1Q8BJQ2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Usp1Q8BJQ2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Usp1Q8BJQ2 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.96■■□□□ 1.43
Usp1Q8BJQ2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Usp1Q8BJQ2 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Usp1Q8BJQ2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Usp1Q8BJQ2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Usp1Q8BJQ2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Usp1Q8BJQ2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Usp1Q8BJQ2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Usp1Q8BJQ2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
Usp1Q8BJQ2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Usp1Q8BJQ2 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Usp1Q8BJQ2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Usp1Q8BJQ2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Usp1Q8BJQ2 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Usp1Q8BJQ2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.93■■□□□ 1.42
Usp1Q8BJQ2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.92■■□□□ 1.42
Usp1Q8BJQ2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp1Q8BJQ2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Usp1Q8BJQ2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp1Q8BJQ2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Usp1Q8BJQ2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Usp1Q8BJQ2 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Usp1Q8BJQ2 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Usp1Q8BJQ2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.89■■□□□ 1.42
Usp1Q8BJQ2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Usp1Q8BJQ2 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Usp1Q8BJQ2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Usp1Q8BJQ2 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.89■■□□□ 1.41
Usp1Q8BJQ2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp1Q8BJQ2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp1Q8BJQ2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp1Q8BJQ2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.87■■□□□ 1.41
Usp1Q8BJQ2 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Usp1Q8BJQ2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Usp1Q8BJQ2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Usp1Q8BJQ2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Usp1Q8BJQ2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Usp1Q8BJQ2 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Usp1Q8BJQ2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Usp1Q8BJQ2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.83■■□□□ 1.41
Usp1Q8BJQ2 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Usp1Q8BJQ2 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.83■■□□□ 1.41
Usp1Q8BJQ2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Usp1Q8BJQ2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Usp1Q8BJQ2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Usp1Q8BJQ2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Usp1Q8BJQ2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Usp1Q8BJQ2 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Usp1Q8BJQ2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.81■■□□□ 1.4
Usp1Q8BJQ2 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Usp1Q8BJQ2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Usp1Q8BJQ2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.8■■□□□ 1.4
Usp1Q8BJQ2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.8■■□□□ 1.4
Usp1Q8BJQ2 Gm15546-201ENSMUST00000122095 826 ntBASIC23.8■■□□□ 1.4
Usp1Q8BJQ2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Usp1Q8BJQ2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Usp1Q8BJQ2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.8■■□□□ 1.4
Usp1Q8BJQ2 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.8■■□□□ 1.4
Usp1Q8BJQ2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Usp1Q8BJQ2 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Usp1Q8BJQ2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Usp1Q8BJQ2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Usp1Q8BJQ2 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.79■■□□□ 1.4
Usp1Q8BJQ2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp1Q8BJQ2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Usp1Q8BJQ2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp1Q8BJQ2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Usp1Q8BJQ2 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp1Q8BJQ2 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp1Q8BJQ2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp1Q8BJQ2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Usp1Q8BJQ2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.77■■□□□ 1.4
Usp1Q8BJQ2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Usp1Q8BJQ2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Usp1Q8BJQ2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Usp1Q8BJQ2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Usp1Q8BJQ2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Usp1Q8BJQ2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Usp1Q8BJQ2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Usp1Q8BJQ2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Usp1Q8BJQ2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Usp1Q8BJQ2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Usp1Q8BJQ2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Usp1Q8BJQ2 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.73■■□□□ 1.39
Usp1Q8BJQ2 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.73■■□□□ 1.39
Usp1Q8BJQ2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Usp1Q8BJQ2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Usp1Q8BJQ2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Usp1Q8BJQ2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Usp1Q8BJQ2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Usp1Q8BJQ2 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Usp1Q8BJQ2 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Usp1Q8BJQ2 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Usp1Q8BJQ2 Gm43566-201ENSMUST00000196851 808 ntBASIC23.71■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms