Protein–RNA interactions for Protein: Q8BJM3

R3hcc1l, Coiled-coil domain-containing protein R3HCC1L, mousemouse

Known RBP Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hcc1lQ8BJM3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
R3hcc1lQ8BJM3 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
R3hcc1lQ8BJM3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.14■■□□□ 1.13
R3hcc1lQ8BJM3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
R3hcc1lQ8BJM3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
R3hcc1lQ8BJM3 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
R3hcc1lQ8BJM3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
R3hcc1lQ8BJM3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
R3hcc1lQ8BJM3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
R3hcc1lQ8BJM3 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
R3hcc1lQ8BJM3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
R3hcc1lQ8BJM3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
R3hcc1lQ8BJM3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
R3hcc1lQ8BJM3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
R3hcc1lQ8BJM3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
R3hcc1lQ8BJM3 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
R3hcc1lQ8BJM3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.11■■□□□ 1.13
R3hcc1lQ8BJM3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.11■■□□□ 1.13
R3hcc1lQ8BJM3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.11■■□□□ 1.13
R3hcc1lQ8BJM3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
R3hcc1lQ8BJM3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
R3hcc1lQ8BJM3 Gm4799-201ENSMUST00000095396 657 ntBASIC22.1■■□□□ 1.13
R3hcc1lQ8BJM3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
R3hcc1lQ8BJM3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.09■■□□□ 1.13
R3hcc1lQ8BJM3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
R3hcc1lQ8BJM3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
R3hcc1lQ8BJM3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.09■■□□□ 1.13
R3hcc1lQ8BJM3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
R3hcc1lQ8BJM3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.08■■□□□ 1.13
R3hcc1lQ8BJM3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
R3hcc1lQ8BJM3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
R3hcc1lQ8BJM3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
R3hcc1lQ8BJM3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
R3hcc1lQ8BJM3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
R3hcc1lQ8BJM3 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
R3hcc1lQ8BJM3 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
R3hcc1lQ8BJM3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
R3hcc1lQ8BJM3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
R3hcc1lQ8BJM3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
R3hcc1lQ8BJM3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
R3hcc1lQ8BJM3 Gm9812-201ENSMUST00000061934 968 ntBASIC22.06■■□□□ 1.12
R3hcc1lQ8BJM3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
R3hcc1lQ8BJM3 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
R3hcc1lQ8BJM3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
R3hcc1lQ8BJM3 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.06■■□□□ 1.12
R3hcc1lQ8BJM3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
R3hcc1lQ8BJM3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
R3hcc1lQ8BJM3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
R3hcc1lQ8BJM3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
R3hcc1lQ8BJM3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
R3hcc1lQ8BJM3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
R3hcc1lQ8BJM3 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
R3hcc1lQ8BJM3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
R3hcc1lQ8BJM3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
R3hcc1lQ8BJM3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
R3hcc1lQ8BJM3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
R3hcc1lQ8BJM3 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.03■■□□□ 1.12
R3hcc1lQ8BJM3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
R3hcc1lQ8BJM3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
R3hcc1lQ8BJM3 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
R3hcc1lQ8BJM3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
R3hcc1lQ8BJM3 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.01■■□□□ 1.11
R3hcc1lQ8BJM3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
R3hcc1lQ8BJM3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
R3hcc1lQ8BJM3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
R3hcc1lQ8BJM3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
R3hcc1lQ8BJM3 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
R3hcc1lQ8BJM3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC22■■□□□ 1.11
R3hcc1lQ8BJM3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
R3hcc1lQ8BJM3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.99■■□□□ 1.11
R3hcc1lQ8BJM3 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
R3hcc1lQ8BJM3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
R3hcc1lQ8BJM3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
R3hcc1lQ8BJM3 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.98■■□□□ 1.11
R3hcc1lQ8BJM3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.98■■□□□ 1.11
R3hcc1lQ8BJM3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
R3hcc1lQ8BJM3 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.98■■□□□ 1.11
R3hcc1lQ8BJM3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
R3hcc1lQ8BJM3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
R3hcc1lQ8BJM3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.98■■□□□ 1.11
R3hcc1lQ8BJM3 Mir3960-201ENSMUST00000198213 73 ntBASIC21.98■■□□□ 1.11
R3hcc1lQ8BJM3 Gm7432-201ENSMUST00000210343 879 ntBASIC21.98■■□□□ 1.11
R3hcc1lQ8BJM3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.98■■□□□ 1.11
R3hcc1lQ8BJM3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
R3hcc1lQ8BJM3 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.98■■□□□ 1.11
R3hcc1lQ8BJM3 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.98■■□□□ 1.11
R3hcc1lQ8BJM3 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.98■■□□□ 1.11
R3hcc1lQ8BJM3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.97■■□□□ 1.11
R3hcc1lQ8BJM3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
R3hcc1lQ8BJM3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
R3hcc1lQ8BJM3 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
R3hcc1lQ8BJM3 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
R3hcc1lQ8BJM3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
R3hcc1lQ8BJM3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
R3hcc1lQ8BJM3 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
R3hcc1lQ8BJM3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
R3hcc1lQ8BJM3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
R3hcc1lQ8BJM3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
R3hcc1lQ8BJM3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.96■■□□□ 1.11
R3hcc1lQ8BJM3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms