Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Depdc1bQ8BH88 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Depdc1bQ8BH88 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC24.32■■□□□ 1.48
Depdc1bQ8BH88 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Depdc1bQ8BH88 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Depdc1bQ8BH88 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Depdc1bQ8BH88 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Depdc1bQ8BH88 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Depdc1bQ8BH88 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
Depdc1bQ8BH88 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Depdc1bQ8BH88 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Depdc1bQ8BH88 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Depdc1bQ8BH88 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Depdc1bQ8BH88 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Depdc1bQ8BH88 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Depdc1bQ8BH88 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Depdc1bQ8BH88 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Depdc1bQ8BH88 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Depdc1bQ8BH88 Mir3960-201ENSMUST00000198213 73 ntBASIC24.29■■□□□ 1.48
Depdc1bQ8BH88 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Depdc1bQ8BH88 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Depdc1bQ8BH88 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Depdc1bQ8BH88 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC24.29■■□□□ 1.48
Depdc1bQ8BH88 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Depdc1bQ8BH88 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC24.28■■□□□ 1.48
Depdc1bQ8BH88 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Depdc1bQ8BH88 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Depdc1bQ8BH88 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Depdc1bQ8BH88 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Depdc1bQ8BH88 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Depdc1bQ8BH88 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Depdc1bQ8BH88 Pkd1-207ENSMUST00000228550 1050 ntBASIC24.27■■□□□ 1.48
Depdc1bQ8BH88 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Depdc1bQ8BH88 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Depdc1bQ8BH88 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Depdc1bQ8BH88 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC24.27■■□□□ 1.48
Depdc1bQ8BH88 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.27■■□□□ 1.48
Depdc1bQ8BH88 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Depdc1bQ8BH88 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Depdc1bQ8BH88 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.26■■□□□ 1.47
Depdc1bQ8BH88 Scarna2-201ENSMUST00000157560 414 ntBASIC24.26■■□□□ 1.47
Depdc1bQ8BH88 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Depdc1bQ8BH88 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Depdc1bQ8BH88 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Depdc1bQ8BH88 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC24.25■■□□□ 1.47
Depdc1bQ8BH88 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC24.25■■□□□ 1.47
Depdc1bQ8BH88 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Depdc1bQ8BH88 Gm9806-201ENSMUST00000051080 552 ntBASIC24.24■■□□□ 1.47
Depdc1bQ8BH88 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Depdc1bQ8BH88 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Depdc1bQ8BH88 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Depdc1bQ8BH88 Gm11687-201ENSMUST00000118911 886 ntBASIC24.23■■□□□ 1.47
Depdc1bQ8BH88 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC24.23■■□□□ 1.47
Depdc1bQ8BH88 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.23■■□□□ 1.47
Depdc1bQ8BH88 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Depdc1bQ8BH88 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Depdc1bQ8BH88 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Depdc1bQ8BH88 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Depdc1bQ8BH88 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
Depdc1bQ8BH88 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC24.21■■□□□ 1.47
Depdc1bQ8BH88 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Depdc1bQ8BH88 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC24.2■■□□□ 1.46
Depdc1bQ8BH88 Gm45364-201ENSMUST00000210883 159 ntBASIC24.2■■□□□ 1.46
Depdc1bQ8BH88 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Depdc1bQ8BH88 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.19■■□□□ 1.46
Depdc1bQ8BH88 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC24.19■■□□□ 1.46
Depdc1bQ8BH88 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Depdc1bQ8BH88 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Depdc1bQ8BH88 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Depdc1bQ8BH88 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Depdc1bQ8BH88 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC24.18■■□□□ 1.46
Depdc1bQ8BH88 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
Depdc1bQ8BH88 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Depdc1bQ8BH88 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Depdc1bQ8BH88 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Depdc1bQ8BH88 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Depdc1bQ8BH88 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC24.17■■□□□ 1.46
Depdc1bQ8BH88 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Depdc1bQ8BH88 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Depdc1bQ8BH88 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.16■■□□□ 1.46
Depdc1bQ8BH88 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Depdc1bQ8BH88 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Depdc1bQ8BH88 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Depdc1bQ8BH88 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Depdc1bQ8BH88 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Depdc1bQ8BH88 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Depdc1bQ8BH88 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Depdc1bQ8BH88 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Depdc1bQ8BH88 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Depdc1bQ8BH88 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Depdc1bQ8BH88 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Depdc1bQ8BH88 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Depdc1bQ8BH88 Gm16437-201ENSMUST00000025669 507 ntBASIC24.14■■□□□ 1.45
Depdc1bQ8BH88 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Depdc1bQ8BH88 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Depdc1bQ8BH88 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Depdc1bQ8BH88 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Depdc1bQ8BH88 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Depdc1bQ8BH88 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.13■■□□□ 1.45
Depdc1bQ8BH88 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms