Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Ush1gQ80T11 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.74■■□□□ 1.55
Ush1gQ80T11 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.74■■□□□ 1.55
Ush1gQ80T11 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Ush1gQ80T11 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Ush1gQ80T11 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
Ush1gQ80T11 Gm15546-201ENSMUST00000122095 826 ntBASIC24.72■■□□□ 1.55
Ush1gQ80T11 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Ush1gQ80T11 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
Ush1gQ80T11 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC24.71■■□□□ 1.55
Ush1gQ80T11 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
Ush1gQ80T11 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ush1gQ80T11 Gm4419-202ENSMUST00000226239 1431 ntBASIC24.7■■□□□ 1.55
Ush1gQ80T11 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Ush1gQ80T11 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
Ush1gQ80T11 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
Ush1gQ80T11 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Ush1gQ80T11 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ush1gQ80T11 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
Ush1gQ80T11 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Ush1gQ80T11 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ush1gQ80T11 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC24.68■■□□□ 1.54
Ush1gQ80T11 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ush1gQ80T11 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Ush1gQ80T11 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ush1gQ80T11 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.67■■□□□ 1.54
Ush1gQ80T11 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
Ush1gQ80T11 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ush1gQ80T11 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC24.66■■□□□ 1.54
Ush1gQ80T11 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Ush1gQ80T11 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Ush1gQ80T11 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
Ush1gQ80T11 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.64■■□□□ 1.54
Ush1gQ80T11 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ush1gQ80T11 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ush1gQ80T11 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ush1gQ80T11 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
Ush1gQ80T11 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Ush1gQ80T11 Gm44428-201ENSMUST00000204474 874 ntBASIC24.63■■□□□ 1.53
Ush1gQ80T11 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.63■■□□□ 1.53
Ush1gQ80T11 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ush1gQ80T11 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ush1gQ80T11 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ush1gQ80T11 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Ush1gQ80T11 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Ush1gQ80T11 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ush1gQ80T11 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ush1gQ80T11 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ush1gQ80T11 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ush1gQ80T11 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Ush1gQ80T11 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Ush1gQ80T11 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ush1gQ80T11 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.6■■□□□ 1.53
Ush1gQ80T11 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ush1gQ80T11 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ush1gQ80T11 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
Ush1gQ80T11 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ush1gQ80T11 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ush1gQ80T11 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Ush1gQ80T11 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
Ush1gQ80T11 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Ush1gQ80T11 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ush1gQ80T11 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Ush1gQ80T11 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Ush1gQ80T11 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ush1gQ80T11 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ush1gQ80T11 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.57■■□□□ 1.52
Ush1gQ80T11 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
Ush1gQ80T11 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ush1gQ80T11 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.56■■□□□ 1.52
Ush1gQ80T11 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC24.55■■□□□ 1.52
Ush1gQ80T11 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ush1gQ80T11 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Ush1gQ80T11 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.55■■□□□ 1.52
Ush1gQ80T11 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC24.55■■□□□ 1.52
Ush1gQ80T11 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ush1gQ80T11 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ush1gQ80T11 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ush1gQ80T11 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ush1gQ80T11 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Ush1gQ80T11 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ush1gQ80T11 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ush1gQ80T11 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ush1gQ80T11 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC24.53■■□□□ 1.52
Ush1gQ80T11 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
Ush1gQ80T11 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Ush1gQ80T11 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ush1gQ80T11 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ush1gQ80T11 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Ush1gQ80T11 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ush1gQ80T11 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ush1gQ80T11 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ush1gQ80T11 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC24.51■■□□□ 1.51
Ush1gQ80T11 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Ush1gQ80T11 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC24.51■■□□□ 1.51
Ush1gQ80T11 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Ush1gQ80T11 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ush1gQ80T11 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ush1gQ80T11 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC24.5■■□□□ 1.51
Ush1gQ80T11 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.5■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms