Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC41.09■■■■■ 4.17
Rtl1Q7M732 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC41.08■■■■■ 4.17
Rtl1Q7M732 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC41.08■■■■■ 4.17
Rtl1Q7M732 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC41.07■■■■■ 4.17
Rtl1Q7M732 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC41.07■■■■■ 4.16
Rtl1Q7M732 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC41.07■■■■■ 4.16
Rtl1Q7M732 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC41.06■■■■■ 4.16
Rtl1Q7M732 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC41.06■■■■■ 4.16
Rtl1Q7M732 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC41.06■■■■■ 4.16
Rtl1Q7M732 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC41.05■■■■■ 4.16
Rtl1Q7M732 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC41.05■■■■■ 4.16
Rtl1Q7M732 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC41.05■■■■■ 4.16
Rtl1Q7M732 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC41.04■■■■■ 4.16
Rtl1Q7M732 Gm10420-201ENSMUST00000121713 882 ntBASIC41.04■■■■■ 4.16
Rtl1Q7M732 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC41.04■■■■■ 4.16
Rtl1Q7M732 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC41.04■■■■■ 4.16
Rtl1Q7M732 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC41.03■■■■■ 4.16
Rtl1Q7M732 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC41.03■■■■■ 4.16
Rtl1Q7M732 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC41.02■■■■■ 4.16
Rtl1Q7M732 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC41.02■■■■■ 4.16
Rtl1Q7M732 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC41.02■■■■■ 4.16
Rtl1Q7M732 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC41.02■■■■■ 4.16
Rtl1Q7M732 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC41.02■■■■■ 4.16
Rtl1Q7M732 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC41.01■■■■■ 4.16
Rtl1Q7M732 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC41.01■■■■■ 4.16
Rtl1Q7M732 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC41■■■■■ 4.15
Rtl1Q7M732 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC41■■■■■ 4.15
Rtl1Q7M732 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC40.98■■■■■ 4.15
Rtl1Q7M732 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC40.98■■■■■ 4.15
Rtl1Q7M732 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC40.98■■■■■ 4.15
Rtl1Q7M732 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC40.98■■■■■ 4.15
Rtl1Q7M732 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC40.98■■■■■ 4.15
Rtl1Q7M732 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC40.97■■■■■ 4.15
Rtl1Q7M732 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC40.97■■■■■ 4.15
Rtl1Q7M732 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC40.96■■■■■ 4.15
Rtl1Q7M732 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC40.96■■■■■ 4.15
Rtl1Q7M732 Gm44428-201ENSMUST00000204474 874 ntBASIC40.96■■■■■ 4.15
Rtl1Q7M732 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC40.95■■■■■ 4.15
Rtl1Q7M732 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC40.91■■■■■ 4.14
Rtl1Q7M732 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC40.91■■■■■ 4.14
Rtl1Q7M732 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC40.91■■■■■ 4.14
Rtl1Q7M732 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC40.91■■■■■ 4.14
Rtl1Q7M732 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC40.9■■■■■ 4.14
Rtl1Q7M732 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC40.9■■■■■ 4.14
Rtl1Q7M732 Gm42699-201ENSMUST00000198104 1657 ntBASIC40.9■■■■■ 4.14
Rtl1Q7M732 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC40.89■■■■■ 4.14
Rtl1Q7M732 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC40.89■■■■■ 4.14
Rtl1Q7M732 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC40.89■■■■■ 4.14
Rtl1Q7M732 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC40.88■■■■■ 4.14
Rtl1Q7M732 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC40.88■■■■■ 4.13
Rtl1Q7M732 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC40.88■■■■■ 4.13
Rtl1Q7M732 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC40.88■■■■■ 4.13
Rtl1Q7M732 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC40.87■■■■■ 4.13
Rtl1Q7M732 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC40.87■■■■■ 4.13
Rtl1Q7M732 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC40.87■■■■■ 4.13
Rtl1Q7M732 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC40.87■■■■■ 4.13
Rtl1Q7M732 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC40.87■■■■■ 4.13
Rtl1Q7M732 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC40.87■■■■■ 4.13
Rtl1Q7M732 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC40.86■■■■■ 4.13
Rtl1Q7M732 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC40.85■■■■■ 4.13
Rtl1Q7M732 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC40.85■■■■■ 4.13
Rtl1Q7M732 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC40.84■■■■■ 4.13
Rtl1Q7M732 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC40.84■■■■■ 4.13
Rtl1Q7M732 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC40.84■■■■■ 4.13
Rtl1Q7M732 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC40.83■■■■■ 4.13
Rtl1Q7M732 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC40.83■■■■■ 4.13
Rtl1Q7M732 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC40.83■■■■■ 4.13
Rtl1Q7M732 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC40.83■■■■■ 4.13
Rtl1Q7M732 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC40.83■■■■■ 4.13
Rtl1Q7M732 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC40.83■■■■■ 4.13
Rtl1Q7M732 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC40.82■■■■■ 4.13
Rtl1Q7M732 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC40.82■■■■■ 4.13
Rtl1Q7M732 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC40.81■■■■■ 4.12
Rtl1Q7M732 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC40.8■■■■■ 4.12
Rtl1Q7M732 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC40.8■■■■■ 4.12
Rtl1Q7M732 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC40.79■■■■■ 4.12
Rtl1Q7M732 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC40.79■■■■■ 4.12
Rtl1Q7M732 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC40.79■■■■■ 4.12
Rtl1Q7M732 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC40.77■■■■■ 4.12
Rtl1Q7M732 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC40.77■■■■■ 4.12
Rtl1Q7M732 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC40.76■■■■■ 4.12
Rtl1Q7M732 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC40.76■■■■■ 4.12
Rtl1Q7M732 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC40.76■■■■■ 4.11
Rtl1Q7M732 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC40.76■■■■■ 4.11
Rtl1Q7M732 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC40.76■■■■■ 4.11
Rtl1Q7M732 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC40.76■■■■■ 4.11
Rtl1Q7M732 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC40.75■■■■■ 4.11
Rtl1Q7M732 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC40.74■■■■■ 4.11
Rtl1Q7M732 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC40.73■■■■■ 4.11
Rtl1Q7M732 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC40.73■■■■■ 4.11
Rtl1Q7M732 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC40.73■■■■■ 4.11
Rtl1Q7M732 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC40.72■■■■■ 4.11
Rtl1Q7M732 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC40.72■■■■■ 4.11
Rtl1Q7M732 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC40.71■■■■■ 4.11
Rtl1Q7M732 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC40.7■■■■■ 4.11
Rtl1Q7M732 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC40.7■■■■■ 4.11
Rtl1Q7M732 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC40.7■■■■■ 4.11
Rtl1Q7M732 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC40.7■■■■■ 4.11
Rtl1Q7M732 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC40.7■■■■■ 4.11
Rtl1Q7M732 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC40.69■■■■■ 4.11
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms