Protein–RNA interactions for Protein: Q6PGH0

Ubtd2, Ubiquitin domain-containing protein 2, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubtd2Q6PGH0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.06■■□□□ 1.12
Ubtd2Q6PGH0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ubtd2Q6PGH0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ubtd2Q6PGH0 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Ubtd2Q6PGH0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ubtd2Q6PGH0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.03■■□□□ 1.12
Ubtd2Q6PGH0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Ubtd2Q6PGH0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.03■■□□□ 1.12
Ubtd2Q6PGH0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ubtd2Q6PGH0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ubtd2Q6PGH0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.02■■□□□ 1.12
Ubtd2Q6PGH0 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ubtd2Q6PGH0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.11
Ubtd2Q6PGH0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
Ubtd2Q6PGH0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ubtd2Q6PGH0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ubtd2Q6PGH0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ubtd2Q6PGH0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Ubtd2Q6PGH0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
Ubtd2Q6PGH0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ubtd2Q6PGH0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Ubtd2Q6PGH0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Ubtd2Q6PGH0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.99■■□□□ 1.11
Ubtd2Q6PGH0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ubtd2Q6PGH0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ubtd2Q6PGH0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ubtd2Q6PGH0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.98■■□□□ 1.11
Ubtd2Q6PGH0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ubtd2Q6PGH0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Ubtd2Q6PGH0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Ubtd2Q6PGH0 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ubtd2Q6PGH0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.97■■□□□ 1.11
Ubtd2Q6PGH0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ubtd2Q6PGH0 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
Ubtd2Q6PGH0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ubtd2Q6PGH0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ubtd2Q6PGH0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Ubtd2Q6PGH0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ubtd2Q6PGH0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC21.97■■□□□ 1.11
Ubtd2Q6PGH0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Ubtd2Q6PGH0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.96■■□□□ 1.11
Ubtd2Q6PGH0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ubtd2Q6PGH0 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ubtd2Q6PGH0 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.95■■□□□ 1.1
Ubtd2Q6PGH0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
Ubtd2Q6PGH0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Ubtd2Q6PGH0 Terc-201ENSMUST00000082862 423 ntBASIC21.95■■□□□ 1.1
Ubtd2Q6PGH0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Ubtd2Q6PGH0 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ubtd2Q6PGH0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Ubtd2Q6PGH0 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Ubtd2Q6PGH0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ubtd2Q6PGH0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ubtd2Q6PGH0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ubtd2Q6PGH0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ubtd2Q6PGH0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC21.93■■□□□ 1.1
Ubtd2Q6PGH0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ubtd2Q6PGH0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.93■■□□□ 1.1
Ubtd2Q6PGH0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ubtd2Q6PGH0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ubtd2Q6PGH0 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ubtd2Q6PGH0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Ubtd2Q6PGH0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ubtd2Q6PGH0 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ubtd2Q6PGH0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.92■■□□□ 1.1
Ubtd2Q6PGH0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Ubtd2Q6PGH0 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.91■■□□□ 1.1
Ubtd2Q6PGH0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ubtd2Q6PGH0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ubtd2Q6PGH0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubtd2Q6PGH0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
Ubtd2Q6PGH0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubtd2Q6PGH0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubtd2Q6PGH0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Ubtd2Q6PGH0 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Ubtd2Q6PGH0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubtd2Q6PGH0 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ubtd2Q6PGH0 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ubtd2Q6PGH0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.89■■□□□ 1.09
Ubtd2Q6PGH0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ubtd2Q6PGH0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Ubtd2Q6PGH0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Ubtd2Q6PGH0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ubtd2Q6PGH0 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.88■■□□□ 1.09
Ubtd2Q6PGH0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.88■■□□□ 1.09
Ubtd2Q6PGH0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Ubtd2Q6PGH0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ubtd2Q6PGH0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Ubtd2Q6PGH0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Ubtd2Q6PGH0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ubtd2Q6PGH0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ubtd2Q6PGH0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ubtd2Q6PGH0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Ubtd2Q6PGH0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ubtd2Q6PGH0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.85■■□□□ 1.09
Ubtd2Q6PGH0 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ubtd2Q6PGH0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.84■■□□□ 1.09
Ubtd2Q6PGH0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.84■■□□□ 1.09
Ubtd2Q6PGH0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ubtd2Q6PGH0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.83■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms