Protein–RNA interactions for Protein: Q6IQX7

Chpf, Chondroitin sulfate synthase 2, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChpfQ6IQX7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ChpfQ6IQX7 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
ChpfQ6IQX7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
ChpfQ6IQX7 Gm43592-201ENSMUST00000196922 1165 ntBASIC24.36■■□□□ 1.49
ChpfQ6IQX7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
ChpfQ6IQX7 AC117769.4-201ENSMUST00000225679 685 ntBASIC24.36■■□□□ 1.49
ChpfQ6IQX7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
ChpfQ6IQX7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
ChpfQ6IQX7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
ChpfQ6IQX7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ChpfQ6IQX7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
ChpfQ6IQX7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC24.34■■□□□ 1.49
ChpfQ6IQX7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ChpfQ6IQX7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
ChpfQ6IQX7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
ChpfQ6IQX7 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.33■■□□□ 1.49
ChpfQ6IQX7 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
ChpfQ6IQX7 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ChpfQ6IQX7 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ChpfQ6IQX7 Gm22567-201ENSMUST00000175542 342 ntBASIC24.32■■□□□ 1.48
ChpfQ6IQX7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ChpfQ6IQX7 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ChpfQ6IQX7 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ChpfQ6IQX7 Fezf2-202ENSMUST00000224023 1917 ntBASIC24.31■■□□□ 1.48
ChpfQ6IQX7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ChpfQ6IQX7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
ChpfQ6IQX7 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
ChpfQ6IQX7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ChpfQ6IQX7 Nsd1-203ENSMUST00000224156 1149 ntBASIC24.3■■□□□ 1.48
ChpfQ6IQX7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ChpfQ6IQX7 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ChpfQ6IQX7 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
ChpfQ6IQX7 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ChpfQ6IQX7 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ChpfQ6IQX7 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ChpfQ6IQX7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ChpfQ6IQX7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC24.28■■□□□ 1.48
ChpfQ6IQX7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC24.28■■□□□ 1.48
ChpfQ6IQX7 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC24.28■■□□□ 1.48
ChpfQ6IQX7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ChpfQ6IQX7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
ChpfQ6IQX7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC24.27■■□□□ 1.48
ChpfQ6IQX7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC24.27■■□□□ 1.48
ChpfQ6IQX7 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ChpfQ6IQX7 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
ChpfQ6IQX7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ChpfQ6IQX7 Gm13238-201ENSMUST00000117655 780 ntBASIC24.26■■□□□ 1.47
ChpfQ6IQX7 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.26■■□□□ 1.47
ChpfQ6IQX7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC24.26■■□□□ 1.47
ChpfQ6IQX7 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ChpfQ6IQX7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ChpfQ6IQX7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ChpfQ6IQX7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
ChpfQ6IQX7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ChpfQ6IQX7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ChpfQ6IQX7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ChpfQ6IQX7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
ChpfQ6IQX7 Gm43566-201ENSMUST00000196851 808 ntBASIC24.24■■□□□ 1.47
ChpfQ6IQX7 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ChpfQ6IQX7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
ChpfQ6IQX7 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ChpfQ6IQX7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
ChpfQ6IQX7 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
ChpfQ6IQX7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
ChpfQ6IQX7 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
ChpfQ6IQX7 Gm45444-201ENSMUST00000211394 898 ntBASIC24.21■■□□□ 1.47
ChpfQ6IQX7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ChpfQ6IQX7 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
ChpfQ6IQX7 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
ChpfQ6IQX7 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
ChpfQ6IQX7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
ChpfQ6IQX7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC24.2■■□□□ 1.46
ChpfQ6IQX7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC24.2■■□□□ 1.46
ChpfQ6IQX7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.2■■□□□ 1.46
ChpfQ6IQX7 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
ChpfQ6IQX7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC24.19■■□□□ 1.46
ChpfQ6IQX7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC24.19■■□□□ 1.46
ChpfQ6IQX7 Gm15820-201ENSMUST00000201566 728 ntBASIC24.19■■□□□ 1.46
ChpfQ6IQX7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC24.19■■□□□ 1.46
ChpfQ6IQX7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
ChpfQ6IQX7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ChpfQ6IQX7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ChpfQ6IQX7 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC24.18■■□□□ 1.46
ChpfQ6IQX7 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ChpfQ6IQX7 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
ChpfQ6IQX7 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
ChpfQ6IQX7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
ChpfQ6IQX7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
ChpfQ6IQX7 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
ChpfQ6IQX7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
ChpfQ6IQX7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
ChpfQ6IQX7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
ChpfQ6IQX7 AC093043.1-201ENSMUST00000226700 898 ntBASIC24.16■■□□□ 1.46
ChpfQ6IQX7 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
ChpfQ6IQX7 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC24.16■■□□□ 1.46
ChpfQ6IQX7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ChpfQ6IQX7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
ChpfQ6IQX7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ChpfQ6IQX7 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
ChpfQ6IQX7 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms