Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Scn9aQ62205 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
Scn9aQ62205 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC27.49■■□□□ 1.99
Scn9aQ62205 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Scn9aQ62205 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC27.48■■□□□ 1.99
Scn9aQ62205 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC27.48■■□□□ 1.99
Scn9aQ62205 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Scn9aQ62205 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
Scn9aQ62205 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC27.47■■□□□ 1.99
Scn9aQ62205 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC27.47■■□□□ 1.99
Scn9aQ62205 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Scn9aQ62205 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Scn9aQ62205 Gm9959-201ENSMUST00000068277 390 ntBASIC27.46■■□□□ 1.99
Scn9aQ62205 Gm37847-201ENSMUST00000192163 1497 ntBASIC27.45■■□□□ 1.98
Scn9aQ62205 Gm31748-201ENSMUST00000194938 1497 ntBASIC27.45■■□□□ 1.98
Scn9aQ62205 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Scn9aQ62205 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC27.44■■□□□ 1.98
Scn9aQ62205 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
Scn9aQ62205 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC27.43■■□□□ 1.98
Scn9aQ62205 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC27.43■■□□□ 1.98
Scn9aQ62205 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC27.43■■□□□ 1.98
Scn9aQ62205 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Scn9aQ62205 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
Scn9aQ62205 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Scn9aQ62205 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC27.41■■□□□ 1.98
Scn9aQ62205 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC27.4■■□□□ 1.98
Scn9aQ62205 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
Scn9aQ62205 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Scn9aQ62205 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Scn9aQ62205 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC27.4■■□□□ 1.98
Scn9aQ62205 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC27.4■■□□□ 1.98
Scn9aQ62205 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
Scn9aQ62205 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Scn9aQ62205 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC27.39■■□□□ 1.97
Scn9aQ62205 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.38■■□□□ 1.97
Scn9aQ62205 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Scn9aQ62205 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC27.37■■□□□ 1.97
Scn9aQ62205 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Scn9aQ62205 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
Scn9aQ62205 Gm42501-201ENSMUST00000200220 1026 ntBASIC27.37■■□□□ 1.97
Scn9aQ62205 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
Scn9aQ62205 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Scn9aQ62205 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Scn9aQ62205 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Scn9aQ62205 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC27.35■■□□□ 1.97
Scn9aQ62205 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Scn9aQ62205 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC27.34■■□□□ 1.97
Scn9aQ62205 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Scn9aQ62205 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Scn9aQ62205 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Scn9aQ62205 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Scn9aQ62205 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC27.33■■□□□ 1.97
Scn9aQ62205 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Scn9aQ62205 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Scn9aQ62205 Gm4419-202ENSMUST00000226239 1431 ntBASIC27.31■■□□□ 1.96
Scn9aQ62205 Gm18755-201ENSMUST00000218030 1099 ntBASIC27.31■■□□□ 1.96
Scn9aQ62205 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
Scn9aQ62205 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC27.31■■□□□ 1.96
Scn9aQ62205 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC27.3■■□□□ 1.96
Scn9aQ62205 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Scn9aQ62205 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Scn9aQ62205 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Scn9aQ62205 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Scn9aQ62205 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC27.29■■□□□ 1.96
Scn9aQ62205 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Scn9aQ62205 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Scn9aQ62205 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Scn9aQ62205 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Scn9aQ62205 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Scn9aQ62205 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
Scn9aQ62205 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC27.27■■□□□ 1.96
Scn9aQ62205 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC27.27■■□□□ 1.96
Scn9aQ62205 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Scn9aQ62205 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Scn9aQ62205 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
Scn9aQ62205 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Scn9aQ62205 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Scn9aQ62205 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
Scn9aQ62205 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC27.26■■□□□ 1.95
Scn9aQ62205 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Scn9aQ62205 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
Scn9aQ62205 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Scn9aQ62205 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Scn9aQ62205 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Scn9aQ62205 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Scn9aQ62205 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Scn9aQ62205 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC27.22■■□□□ 1.95
Scn9aQ62205 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC27.22■■□□□ 1.95
Scn9aQ62205 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Scn9aQ62205 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Scn9aQ62205 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Scn9aQ62205 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC27.2■■□□□ 1.95
Scn9aQ62205 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Scn9aQ62205 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
Scn9aQ62205 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC27.2■■□□□ 1.94
Scn9aQ62205 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC27.18■■□□□ 1.94
Scn9aQ62205 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Scn9aQ62205 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
Scn9aQ62205 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
Scn9aQ62205 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms