Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.12■□□□□ 0.33
Notch3Q61982 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.11■□□□□ 0.33
Notch3Q61982 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Notch3Q61982 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Notch3Q61982 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Notch3Q61982 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Notch3Q61982 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Notch3Q61982 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.1■□□□□ 0.33
Notch3Q61982 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Notch3Q61982 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Notch3Q61982 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Notch3Q61982 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Notch3Q61982 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Notch3Q61982 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Notch3Q61982 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Notch3Q61982 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Notch3Q61982 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Notch3Q61982 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Notch3Q61982 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Notch3Q61982 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Notch3Q61982 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.09■□□□□ 0.33
Notch3Q61982 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Notch3Q61982 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.08■□□□□ 0.32
Notch3Q61982 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Notch3Q61982 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Notch3Q61982 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Notch3Q61982 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Notch3Q61982 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Notch3Q61982 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Notch3Q61982 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Notch3Q61982 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Notch3Q61982 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Notch3Q61982 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC17.06■□□□□ 0.32
Notch3Q61982 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Notch3Q61982 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Notch3Q61982 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Notch3Q61982 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Notch3Q61982 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Notch3Q61982 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Notch3Q61982 Gm13238-201ENSMUST00000117655 780 ntBASIC17.05■□□□□ 0.32
Notch3Q61982 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Notch3Q61982 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Notch3Q61982 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Notch3Q61982 AC153890.1-201ENSMUST00000220021 2469 ntBASIC17.04■□□□□ 0.32
Notch3Q61982 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.04■□□□□ 0.32
Notch3Q61982 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Notch3Q61982 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Notch3Q61982 Fezf2-202ENSMUST00000224023 1917 ntBASIC17.03■□□□□ 0.32
Notch3Q61982 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Notch3Q61982 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Notch3Q61982 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.03■□□□□ 0.32
Notch3Q61982 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Notch3Q61982 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Notch3Q61982 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Notch3Q61982 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Notch3Q61982 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Notch3Q61982 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Notch3Q61982 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Notch3Q61982 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Notch3Q61982 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC17.02■□□□□ 0.32
Notch3Q61982 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Notch3Q61982 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Notch3Q61982 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Notch3Q61982 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Notch3Q61982 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
Notch3Q61982 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
Notch3Q61982 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Notch3Q61982 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.01■□□□□ 0.31
Notch3Q61982 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Notch3Q61982 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Notch3Q61982 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Notch3Q61982 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Notch3Q61982 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Notch3Q61982 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Notch3Q61982 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Notch3Q61982 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Notch3Q61982 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Notch3Q61982 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Notch3Q61982 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Notch3Q61982 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.99■□□□□ 0.31
Notch3Q61982 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Notch3Q61982 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC16.99■□□□□ 0.31
Notch3Q61982 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Notch3Q61982 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Notch3Q61982 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.98■□□□□ 0.31
Notch3Q61982 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
Notch3Q61982 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Notch3Q61982 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Notch3Q61982 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Notch3Q61982 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Notch3Q61982 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Notch3Q61982 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Notch3Q61982 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Notch3Q61982 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Notch3Q61982 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.97■□□□□ 0.31
Notch3Q61982 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.97■□□□□ 0.31
Notch3Q61982 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.97■□□□□ 0.31
Notch3Q61982 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.97■□□□□ 0.31
Notch3Q61982 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Notch3Q61982 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms