Protein–RNA interactions for Protein: Q5SSE9

Abca13, ATP-binding cassette sub-family A member 13, mousemouse

Predictions only

Length 5,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca13Q5SSE9 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Abca13Q5SSE9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.93□□□□□ -0.18
Abca13Q5SSE9 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Abca13Q5SSE9 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Abca13Q5SSE9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.93□□□□□ -0.18
Abca13Q5SSE9 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Abca13Q5SSE9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Abca13Q5SSE9 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Abca13Q5SSE9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.93□□□□□ -0.18
Abca13Q5SSE9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Abca13Q5SSE9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Abca13Q5SSE9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Abca13Q5SSE9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Abca13Q5SSE9 Gm22325-201ENSMUST00000158904 308 ntBASIC13.91□□□□□ -0.18
Abca13Q5SSE9 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Abca13Q5SSE9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Abca13Q5SSE9 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Abca13Q5SSE9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Abca13Q5SSE9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Abca13Q5SSE9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC13.9□□□□□ -0.18
Abca13Q5SSE9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Abca13Q5SSE9 Gm18284-201ENSMUST00000172604 624 ntBASIC13.9□□□□□ -0.18
Abca13Q5SSE9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Abca13Q5SSE9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abca13Q5SSE9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC13.89□□□□□ -0.19
Abca13Q5SSE9 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abca13Q5SSE9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abca13Q5SSE9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Abca13Q5SSE9 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.89□□□□□ -0.19
Abca13Q5SSE9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Abca13Q5SSE9 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
Abca13Q5SSE9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC13.88□□□□□ -0.19
Abca13Q5SSE9 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Abca13Q5SSE9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Abca13Q5SSE9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Abca13Q5SSE9 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abca13Q5SSE9 Gm43592-201ENSMUST00000196922 1165 ntBASIC13.87□□□□□ -0.19
Abca13Q5SSE9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Abca13Q5SSE9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Abca13Q5SSE9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.87□□□□□ -0.19
Abca13Q5SSE9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Abca13Q5SSE9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abca13Q5SSE9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abca13Q5SSE9 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Abca13Q5SSE9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abca13Q5SSE9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC13.86□□□□□ -0.19
Abca13Q5SSE9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Abca13Q5SSE9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Abca13Q5SSE9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Abca13Q5SSE9 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC13.85□□□□□ -0.19
Abca13Q5SSE9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Abca13Q5SSE9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Abca13Q5SSE9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Abca13Q5SSE9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Abca13Q5SSE9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Abca13Q5SSE9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Abca13Q5SSE9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Abca13Q5SSE9 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Abca13Q5SSE9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Abca13Q5SSE9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Abca13Q5SSE9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Abca13Q5SSE9 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Abca13Q5SSE9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC13.84□□□□□ -0.19
Abca13Q5SSE9 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Abca13Q5SSE9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC13.83□□□□□ -0.2
Abca13Q5SSE9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Abca13Q5SSE9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Abca13Q5SSE9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Abca13Q5SSE9 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Abca13Q5SSE9 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Abca13Q5SSE9 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC13.83□□□□□ -0.2
Abca13Q5SSE9 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Abca13Q5SSE9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Abca13Q5SSE9 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Abca13Q5SSE9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC13.82□□□□□ -0.2
Abca13Q5SSE9 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Abca13Q5SSE9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Abca13Q5SSE9 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Abca13Q5SSE9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Abca13Q5SSE9 Terc-201ENSMUST00000082862 423 ntBASIC13.82□□□□□ -0.2
Abca13Q5SSE9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Abca13Q5SSE9 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Abca13Q5SSE9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC13.82□□□□□ -0.2
Abca13Q5SSE9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC13.82□□□□□ -0.2
Abca13Q5SSE9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Abca13Q5SSE9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC13.81□□□□□ -0.2
Abca13Q5SSE9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Abca13Q5SSE9 AC140930.3-201ENSMUST00000222935 274 ntBASIC13.81□□□□□ -0.2
Abca13Q5SSE9 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca13Q5SSE9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca13Q5SSE9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca13Q5SSE9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca13Q5SSE9 Gm18755-201ENSMUST00000218030 1099 ntBASIC13.8□□□□□ -0.2
Abca13Q5SSE9 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Abca13Q5SSE9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Abca13Q5SSE9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Abca13Q5SSE9 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Abca13Q5SSE9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Abca13Q5SSE9 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Abca13Q5SSE9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms