Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trdv4Q5R1A3 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.54■□□□□ 0.56
Trdv4Q5R1A3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdv4Q5R1A3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Trdv4Q5R1A3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdv4Q5R1A3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdv4Q5R1A3 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdv4Q5R1A3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trdv4Q5R1A3 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Trdv4Q5R1A3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trdv4Q5R1A3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trdv4Q5R1A3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Trdv4Q5R1A3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.53■□□□□ 0.56
Trdv4Q5R1A3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Trdv4Q5R1A3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.53■□□□□ 0.56
Trdv4Q5R1A3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.53■□□□□ 0.56
Trdv4Q5R1A3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trdv4Q5R1A3 Gm9812-201ENSMUST00000061934 968 ntBASIC18.53■□□□□ 0.56
Trdv4Q5R1A3 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Trdv4Q5R1A3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trdv4Q5R1A3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Trdv4Q5R1A3 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trdv4Q5R1A3 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Trdv4Q5R1A3 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.52■□□□□ 0.56
Trdv4Q5R1A3 Gm45364-201ENSMUST00000210883 159 ntBASIC18.52■□□□□ 0.56
Trdv4Q5R1A3 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trdv4Q5R1A3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Trdv4Q5R1A3 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trdv4Q5R1A3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trdv4Q5R1A3 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Trdv4Q5R1A3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
Trdv4Q5R1A3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trdv4Q5R1A3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trdv4Q5R1A3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trdv4Q5R1A3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trdv4Q5R1A3 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Trdv4Q5R1A3 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trdv4Q5R1A3 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Trdv4Q5R1A3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.49■□□□□ 0.55
Trdv4Q5R1A3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trdv4Q5R1A3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trdv4Q5R1A3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Trdv4Q5R1A3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.49■□□□□ 0.55
Trdv4Q5R1A3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Trdv4Q5R1A3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trdv4Q5R1A3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
Trdv4Q5R1A3 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Trdv4Q5R1A3 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Trdv4Q5R1A3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.47■□□□□ 0.55
Trdv4Q5R1A3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Trdv4Q5R1A3 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.47■□□□□ 0.55
Trdv4Q5R1A3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trdv4Q5R1A3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Trdv4Q5R1A3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trdv4Q5R1A3 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trdv4Q5R1A3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.46■□□□□ 0.55
Trdv4Q5R1A3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trdv4Q5R1A3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Trdv4Q5R1A3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC18.46■□□□□ 0.55
Trdv4Q5R1A3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trdv4Q5R1A3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trdv4Q5R1A3 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.45■□□□□ 0.54
Trdv4Q5R1A3 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trdv4Q5R1A3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Trdv4Q5R1A3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trdv4Q5R1A3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trdv4Q5R1A3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trdv4Q5R1A3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Trdv4Q5R1A3 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trdv4Q5R1A3 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.43■□□□□ 0.54
Trdv4Q5R1A3 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trdv4Q5R1A3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.43■□□□□ 0.54
Trdv4Q5R1A3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Trdv4Q5R1A3 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
Trdv4Q5R1A3 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trdv4Q5R1A3 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.42■□□□□ 0.54
Trdv4Q5R1A3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trdv4Q5R1A3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.41■□□□□ 0.54
Trdv4Q5R1A3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trdv4Q5R1A3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trdv4Q5R1A3 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trdv4Q5R1A3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trdv4Q5R1A3 Terc-201ENSMUST00000082862 423 ntBASIC18.4■□□□□ 0.54
Trdv4Q5R1A3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trdv4Q5R1A3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trdv4Q5R1A3 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trdv4Q5R1A3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Trdv4Q5R1A3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trdv4Q5R1A3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.39■□□□□ 0.53
Trdv4Q5R1A3 Gm6311-201ENSMUST00000073790 878 ntBASIC18.39■□□□□ 0.53
Trdv4Q5R1A3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trdv4Q5R1A3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trdv4Q5R1A3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trdv4Q5R1A3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trdv4Q5R1A3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trdv4Q5R1A3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.38■□□□□ 0.53
Trdv4Q5R1A3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.38■□□□□ 0.53
Trdv4Q5R1A3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trdv4Q5R1A3 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Trdv4Q5R1A3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms