Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Vps13aQ5H8C4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vps13aQ5H8C4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vps13aQ5H8C4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Vps13aQ5H8C4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC23.13■■□□□ 1.29
Vps13aQ5H8C4 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Vps13aQ5H8C4 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Vps13aQ5H8C4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.09■■□□□ 1.29
Vps13aQ5H8C4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Vps13aQ5H8C4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Vps13aQ5H8C4 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Vps13aQ5H8C4 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Vps13aQ5H8C4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Vps13aQ5H8C4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Vps13aQ5H8C4 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Vps13aQ5H8C4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC23.08■■□□□ 1.29
Vps13aQ5H8C4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.08■■□□□ 1.29
Vps13aQ5H8C4 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Vps13aQ5H8C4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
Vps13aQ5H8C4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Vps13aQ5H8C4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Vps13aQ5H8C4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Vps13aQ5H8C4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC23.06■■□□□ 1.28
Vps13aQ5H8C4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Vps13aQ5H8C4 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Vps13aQ5H8C4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Vps13aQ5H8C4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Vps13aQ5H8C4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.06■■□□□ 1.28
Vps13aQ5H8C4 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Vps13aQ5H8C4 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.06■■□□□ 1.28
Vps13aQ5H8C4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Vps13aQ5H8C4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Vps13aQ5H8C4 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Vps13aQ5H8C4 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Vps13aQ5H8C4 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Vps13aQ5H8C4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Vps13aQ5H8C4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Vps13aQ5H8C4 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
Vps13aQ5H8C4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Vps13aQ5H8C4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC23.04■■□□□ 1.28
Vps13aQ5H8C4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.04■■□□□ 1.28
Vps13aQ5H8C4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC23.04■■□□□ 1.28
Vps13aQ5H8C4 Gm13241-201ENSMUST00000094493 780 ntBASIC23.04■■□□□ 1.28
Vps13aQ5H8C4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Vps13aQ5H8C4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Vps13aQ5H8C4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.03■■□□□ 1.28
Vps13aQ5H8C4 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Vps13aQ5H8C4 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.03■■□□□ 1.28
Vps13aQ5H8C4 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.02■■□□□ 1.28
Vps13aQ5H8C4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Vps13aQ5H8C4 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.02■■□□□ 1.28
Vps13aQ5H8C4 Terc-201ENSMUST00000082862 423 ntBASIC23.02■■□□□ 1.28
Vps13aQ5H8C4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Vps13aQ5H8C4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Vps13aQ5H8C4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC23.01■■□□□ 1.27
Vps13aQ5H8C4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
Vps13aQ5H8C4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Vps13aQ5H8C4 Gm43445-201ENSMUST00000198564 2091 ntBASIC23■■□□□ 1.27
Vps13aQ5H8C4 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23■■□□□ 1.27
Vps13aQ5H8C4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
Vps13aQ5H8C4 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.99■■□□□ 1.27
Vps13aQ5H8C4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Vps13aQ5H8C4 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Vps13aQ5H8C4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Vps13aQ5H8C4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Vps13aQ5H8C4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.97■■□□□ 1.27
Vps13aQ5H8C4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Vps13aQ5H8C4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Vps13aQ5H8C4 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC22.97■■□□□ 1.27
Vps13aQ5H8C4 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Vps13aQ5H8C4 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Vps13aQ5H8C4 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Vps13aQ5H8C4 Gm43034-201ENSMUST00000198678 1364 ntBASIC22.96■■□□□ 1.27
Vps13aQ5H8C4 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Vps13aQ5H8C4 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Vps13aQ5H8C4 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Vps13aQ5H8C4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Vps13aQ5H8C4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Vps13aQ5H8C4 Gm44428-201ENSMUST00000204474 874 ntBASIC22.95■■□□□ 1.26
Vps13aQ5H8C4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Vps13aQ5H8C4 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.95■■□□□ 1.26
Vps13aQ5H8C4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.94■■□□□ 1.26
Vps13aQ5H8C4 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Vps13aQ5H8C4 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.93■■□□□ 1.26
Vps13aQ5H8C4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Vps13aQ5H8C4 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Vps13aQ5H8C4 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.93■■□□□ 1.26
Vps13aQ5H8C4 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Vps13aQ5H8C4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC22.92■■□□□ 1.26
Vps13aQ5H8C4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Vps13aQ5H8C4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Vps13aQ5H8C4 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Vps13aQ5H8C4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Vps13aQ5H8C4 Gm10232-201ENSMUST00000089221 720 ntBASIC22.91■■□□□ 1.26
Vps13aQ5H8C4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC22.91■■□□□ 1.26
Vps13aQ5H8C4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Vps13aQ5H8C4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Vps13aQ5H8C4 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Vps13aQ5H8C4 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Vps13aQ5H8C4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms