Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Rnf20Q5DTM8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
Rnf20Q5DTM8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Rnf20Q5DTM8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC26.77■■□□□ 1.88
Rnf20Q5DTM8 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rnf20Q5DTM8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rnf20Q5DTM8 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Rnf20Q5DTM8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.87
Rnf20Q5DTM8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Rnf20Q5DTM8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Rnf20Q5DTM8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Rnf20Q5DTM8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Rnf20Q5DTM8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Rnf20Q5DTM8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.74■■□□□ 1.87
Rnf20Q5DTM8 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.74■■□□□ 1.87
Rnf20Q5DTM8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Rnf20Q5DTM8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
Rnf20Q5DTM8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Rnf20Q5DTM8 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Rnf20Q5DTM8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Rnf20Q5DTM8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC26.71■■□□□ 1.87
Rnf20Q5DTM8 Terc-201ENSMUST00000082862 423 ntBASIC26.71■■□□□ 1.87
Rnf20Q5DTM8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
Rnf20Q5DTM8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Rnf20Q5DTM8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Rnf20Q5DTM8 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Rnf20Q5DTM8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC26.69■■□□□ 1.86
Rnf20Q5DTM8 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Rnf20Q5DTM8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC26.68■■□□□ 1.86
Rnf20Q5DTM8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Rnf20Q5DTM8 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Rnf20Q5DTM8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.67■■□□□ 1.86
Rnf20Q5DTM8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Rnf20Q5DTM8 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Rnf20Q5DTM8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Rnf20Q5DTM8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Rnf20Q5DTM8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Rnf20Q5DTM8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Rnf20Q5DTM8 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC26.66■■□□□ 1.86
Rnf20Q5DTM8 Gm6311-201ENSMUST00000073790 878 ntBASIC26.66■■□□□ 1.86
Rnf20Q5DTM8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Rnf20Q5DTM8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
Rnf20Q5DTM8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26.66■■□□□ 1.86
Rnf20Q5DTM8 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
Rnf20Q5DTM8 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Rnf20Q5DTM8 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rnf20Q5DTM8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rnf20Q5DTM8 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC26.64■■□□□ 1.86
Rnf20Q5DTM8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
Rnf20Q5DTM8 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC26.63■■□□□ 1.85
Rnf20Q5DTM8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC26.63■■□□□ 1.85
Rnf20Q5DTM8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rnf20Q5DTM8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Rnf20Q5DTM8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.63■■□□□ 1.85
Rnf20Q5DTM8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Rnf20Q5DTM8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rnf20Q5DTM8 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Rnf20Q5DTM8 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Rnf20Q5DTM8 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC26.62■■□□□ 1.85
Rnf20Q5DTM8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Rnf20Q5DTM8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC26.61■■□□□ 1.85
Rnf20Q5DTM8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC26.61■■□□□ 1.85
Rnf20Q5DTM8 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Rnf20Q5DTM8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
Rnf20Q5DTM8 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rnf20Q5DTM8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rnf20Q5DTM8 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rnf20Q5DTM8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rnf20Q5DTM8 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC26.6■■□□□ 1.85
Rnf20Q5DTM8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Rnf20Q5DTM8 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Rnf20Q5DTM8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Rnf20Q5DTM8 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Rnf20Q5DTM8 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
Rnf20Q5DTM8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC26.59■■□□□ 1.85
Rnf20Q5DTM8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.59■■□□□ 1.85
Rnf20Q5DTM8 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Rnf20Q5DTM8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rnf20Q5DTM8 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rnf20Q5DTM8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rnf20Q5DTM8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rnf20Q5DTM8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Rnf20Q5DTM8 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC26.58■■□□□ 1.85
Rnf20Q5DTM8 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
Rnf20Q5DTM8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Rnf20Q5DTM8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC26.57■■□□□ 1.84
Rnf20Q5DTM8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
Rnf20Q5DTM8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Rnf20Q5DTM8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Rnf20Q5DTM8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rnf20Q5DTM8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Rnf20Q5DTM8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC26.55■■□□□ 1.84
Rnf20Q5DTM8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Rnf20Q5DTM8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Rnf20Q5DTM8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Rnf20Q5DTM8 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC26.53■■□□□ 1.84
Rnf20Q5DTM8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.53■■□□□ 1.84
Rnf20Q5DTM8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Rnf20Q5DTM8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Rnf20Q5DTM8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 120.4 ms