Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shisa3Q3UPR0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shisa3Q3UPR0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Shisa3Q3UPR0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Shisa3Q3UPR0 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Shisa3Q3UPR0 Gm30023-201ENSMUST00000197970 889 ntBASIC19.48■□□□□ 0.71
Shisa3Q3UPR0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Shisa3Q3UPR0 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.47■□□□□ 0.71
Shisa3Q3UPR0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Shisa3Q3UPR0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shisa3Q3UPR0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shisa3Q3UPR0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shisa3Q3UPR0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shisa3Q3UPR0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Shisa3Q3UPR0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shisa3Q3UPR0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Shisa3Q3UPR0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Shisa3Q3UPR0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.45■□□□□ 0.7
Shisa3Q3UPR0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shisa3Q3UPR0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shisa3Q3UPR0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.44■□□□□ 0.7
Shisa3Q3UPR0 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Shisa3Q3UPR0 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shisa3Q3UPR0 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.44■□□□□ 0.7
Shisa3Q3UPR0 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Shisa3Q3UPR0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.44■□□□□ 0.7
Shisa3Q3UPR0 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.43■□□□□ 0.7
Shisa3Q3UPR0 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shisa3Q3UPR0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shisa3Q3UPR0 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shisa3Q3UPR0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Shisa3Q3UPR0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Shisa3Q3UPR0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Shisa3Q3UPR0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.43■□□□□ 0.7
Shisa3Q3UPR0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Shisa3Q3UPR0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Shisa3Q3UPR0 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.42■□□□□ 0.7
Shisa3Q3UPR0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa3Q3UPR0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Shisa3Q3UPR0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa3Q3UPR0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa3Q3UPR0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Shisa3Q3UPR0 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shisa3Q3UPR0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shisa3Q3UPR0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Shisa3Q3UPR0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.41■□□□□ 0.7
Shisa3Q3UPR0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Shisa3Q3UPR0 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shisa3Q3UPR0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shisa3Q3UPR0 Gm6821-201ENSMUST00000107540 542 ntBASIC19.4■□□□□ 0.7
Shisa3Q3UPR0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shisa3Q3UPR0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.4■□□□□ 0.7
Shisa3Q3UPR0 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.4■□□□□ 0.7
Shisa3Q3UPR0 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shisa3Q3UPR0 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.4■□□□□ 0.7
Shisa3Q3UPR0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Shisa3Q3UPR0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.39■□□□□ 0.7
Shisa3Q3UPR0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shisa3Q3UPR0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Shisa3Q3UPR0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shisa3Q3UPR0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Shisa3Q3UPR0 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shisa3Q3UPR0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Shisa3Q3UPR0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Shisa3Q3UPR0 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Shisa3Q3UPR0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.38■□□□□ 0.69
Shisa3Q3UPR0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Shisa3Q3UPR0 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Shisa3Q3UPR0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Shisa3Q3UPR0 Nkain2-201ENSMUST00000092602 558 ntBASIC19.38■□□□□ 0.69
Shisa3Q3UPR0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shisa3Q3UPR0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shisa3Q3UPR0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Shisa3Q3UPR0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shisa3Q3UPR0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.36■□□□□ 0.69
Shisa3Q3UPR0 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.36■□□□□ 0.69
Shisa3Q3UPR0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shisa3Q3UPR0 Gm8503-201ENSMUST00000118131 455 ntBASIC19.35■□□□□ 0.69
Shisa3Q3UPR0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.35■□□□□ 0.69
Shisa3Q3UPR0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Shisa3Q3UPR0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Shisa3Q3UPR0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Shisa3Q3UPR0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Shisa3Q3UPR0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shisa3Q3UPR0 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Shisa3Q3UPR0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shisa3Q3UPR0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
Shisa3Q3UPR0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shisa3Q3UPR0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shisa3Q3UPR0 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shisa3Q3UPR0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Shisa3Q3UPR0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa3Q3UPR0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shisa3Q3UPR0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Shisa3Q3UPR0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shisa3Q3UPR0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.31■□□□□ 0.68
Shisa3Q3UPR0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shisa3Q3UPR0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shisa3Q3UPR0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shisa3Q3UPR0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms