Protein–RNA interactions for Protein: Q06406

LSM6, U6 snRNA-associated Sm-like protein LSm6, yeastyeast

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM6Q06406 ESC8YOL017W 2145 nt4.92□□□□□ -1.62
LSM6Q06406 AIM3YBR108W 2844 nt4.92□□□□□ -1.62
LSM6Q06406 YDR514CYDR514C 1452 nt4.92□□□□□ -1.62
LSM6Q06406 HAS1YMR290C 1518 nt4.92□□□□□ -1.62
LSM6Q06406 MIP1YOR330C 3765 nt4.91□□□□□ -1.62
LSM6Q06406 ALT2YDR111C 1524 nt4.91□□□□□ -1.62
LSM6Q06406 AFG1YEL052W 1530 nt4.91□□□□□ -1.62
LSM6Q06406 GPI11YDR302W 660 nt4.9□□□□□ -1.63
LSM6Q06406 SKP1YDR328C 585 nt4.9□□□□□ -1.63
LSM6Q06406 MOD5YOR274W 1287 nt4.9□□□□□ -1.63
LSM6Q06406 ATP2YJR121W 1536 nt4.9□□□□□ -1.63
LSM6Q06406 RGT2YDL138W 2292 nt4.9□□□□□ -1.63
LSM6Q06406 CRP1YHR146W 1398 nt4.9□□□□□ -1.63
LSM6Q06406 tA(AGC)DtA(AGC)D 73 nt4.89□□□□□ -1.63
LSM6Q06406 tA(AGC)FtA(AGC)F 73 nt4.89□□□□□ -1.63
LSM6Q06406 tA(AGC)GtA(AGC)G 73 nt4.89□□□□□ -1.63
LSM6Q06406 tA(AGC)HtA(AGC)H 73 nt4.89□□□□□ -1.63
LSM6Q06406 tA(AGC)JtA(AGC)J 73 nt4.89□□□□□ -1.63
LSM6Q06406 tA(AGC)K1tA(AGC)K1 73 nt4.89□□□□□ -1.63
LSM6Q06406 tA(AGC)K2tA(AGC)K2 73 nt4.89□□□□□ -1.63
LSM6Q06406 tA(AGC)LtA(AGC)L 73 nt4.89□□□□□ -1.63
LSM6Q06406 tA(AGC)M1tA(AGC)M1 73 nt4.89□□□□□ -1.63
LSM6Q06406 tA(AGC)M2tA(AGC)M2 73 nt4.89□□□□□ -1.63
LSM6Q06406 tA(AGC)PtA(AGC)P 73 nt4.89□□□□□ -1.63
LSM6Q06406 YNL092WYNL092W 1203 nt4.89□□□□□ -1.63
LSM6Q06406 RPS28AYOR167C 204 nt4.89□□□□□ -1.63
LSM6Q06406 YPL108WYPL108W 507 nt4.89□□□□□ -1.63
LSM6Q06406 UTR2YEL040W 1404 nt4.89□□□□□ -1.63
LSM6Q06406 HEM1YDR232W 1647 nt4.88□□□□□ -1.63
LSM6Q06406 YCR049CYCR049C 447 nt4.88□□□□□ -1.63
LSM6Q06406 DMC1YER179W 1005 nt4.88□□□□□ -1.63
LSM6Q06406 YPT1YFL038C 621 nt4.88□□□□□ -1.63
LSM6Q06406 YDL177CYDL177C 513 nt4.87□□□□□ -1.63
LSM6Q06406 YER156CYER156C 1017 nt4.87□□□□□ -1.63
LSM6Q06406 YGR210CYGR210C 1236 nt4.87□□□□□ -1.63
LSM6Q06406 IRC11YOR013W 471 nt4.87□□□□□ -1.63
LSM6Q06406 IPL1YPL209C 1104 nt4.87□□□□□ -1.63
LSM6Q06406 BZZ1YHR114W 1902 nt4.86□□□□□ -1.63
LSM6Q06406 URH1YDR400W 1023 nt4.86□□□□□ -1.63
LSM6Q06406 YBR113WYBR113W 483 nt4.86□□□□□ -1.63
LSM6Q06406 tG(GCC)BtG(GCC)B 71 nt4.85□□□□□ -1.63
LSM6Q06406 SUF16tG(GCC)C 71 nt4.85□□□□□ -1.63
LSM6Q06406 tG(GCC)D1tG(GCC)D1 71 nt4.85□□□□□ -1.63
LSM6Q06406 tG(GCC)D2tG(GCC)D2 71 nt4.85□□□□□ -1.63
LSM6Q06406 tG(GCC)EtG(GCC)E 71 nt4.85□□□□□ -1.63
LSM6Q06406 SUF20tG(GCC)F1 71 nt4.85□□□□□ -1.63
LSM6Q06406 tG(GCC)F2tG(GCC)F2 71 nt4.85□□□□□ -1.63
LSM6Q06406 tG(GCC)G1tG(GCC)G1 71 nt4.85□□□□□ -1.63
LSM6Q06406 tG(GCC)G2tG(GCC)G2 71 nt4.85□□□□□ -1.63
LSM6Q06406 tG(GCC)J1tG(GCC)J1 71 nt4.85□□□□□ -1.63
LSM6Q06406 SUF23tG(GCC)J2 71 nt4.85□□□□□ -1.63
LSM6Q06406 tG(GCC)MtG(GCC)M 71 nt4.85□□□□□ -1.63
LSM6Q06406 tG(GCC)O1tG(GCC)O1 71 nt4.85□□□□□ -1.63
LSM6Q06406 SUF17tG(GCC)O2 71 nt4.85□□□□□ -1.63
LSM6Q06406 tG(GCC)P1tG(GCC)P1 71 nt4.85□□□□□ -1.63
LSM6Q06406 tG(GCC)P2tG(GCC)P2 71 nt4.85□□□□□ -1.63
LSM6Q06406 FUN14YAL008W 597 nt4.85□□□□□ -1.63
LSM6Q06406 DPM1YPR183W 804 nt4.85□□□□□ -1.63
LSM6Q06406 CIT2YCR005C 1383 nt4.85□□□□□ -1.63
LSM6Q06406 GYP8YFL027C 1494 nt4.85□□□□□ -1.63
LSM6Q06406 MTC5YDR128W 3447 nt4.85□□□□□ -1.63
LSM6Q06406 OSM1YJR051W 1506 nt4.84□□□□□ -1.63
LSM6Q06406 PYK2YOR347C 1521 nt4.84□□□□□ -1.63
LSM6Q06406 YSC83YHR017W 1158 nt4.84□□□□□ -1.63
LSM6Q06406 HTS1YPR033C 1641 nt4.83□□□□□ -1.64
LSM6Q06406 IVY1YDR229W 1362 nt4.83□□□□□ -1.64
LSM6Q06406 STB5YHR178W 2232 nt4.83□□□□□ -1.64
LSM6Q06406 YMR034CYMR034C 1305 nt4.83□□□□□ -1.64
LSM6Q06406 YCR025CYCR025C 411 nt4.83□□□□□ -1.64
LSM6Q06406 DMA1YHR115C 1251 nt4.83□□□□□ -1.64
LSM6Q06406 STS1YIR011C 960 nt4.83□□□□□ -1.64
LSM6Q06406 FBA1YKL060C 1080 nt4.83□□□□□ -1.64
LSM6Q06406 ICT1YLR099C 1185 nt4.83□□□□□ -1.64
LSM6Q06406 PFK2YMR205C 2880 nt4.83□□□□□ -1.64
LSM6Q06406 SAC6YDR129C 1929 nt4.82□□□□□ -1.64
LSM6Q06406 MRPL1YDR116C 858 nt4.82□□□□□ -1.64
LSM6Q06406 VPS61YDR136C 573 nt4.82□□□□□ -1.64
LSM6Q06406 RPP1YHR062C 882 nt4.82□□□□□ -1.64
LSM6Q06406 ERV2YPR037C 591 nt4.82□□□□□ -1.64
LSM6Q06406 PRY3YJL078C 2646 nt4.82□□□□□ -1.64
LSM6Q06406 MRC1YCL061C 3291 nt4.82□□□□□ -1.64
LSM6Q06406 CLB2YPR119W 1476 nt4.81□□□□□ -1.64
LSM6Q06406 NFS1YCL017C 1494 nt4.81□□□□□ -1.64
LSM6Q06406 YIL168WYIL168W 384 nt4.81□□□□□ -1.64
LSM6Q06406 HSP150YJL159W 1242 nt4.81□□□□□ -1.64
LSM6Q06406 ARA2YMR041C 1008 nt4.81□□□□□ -1.64
LSM6Q06406 MKK1YOR231W 1527 nt4.81□□□□□ -1.64
LSM6Q06406 SPR1YOR190W 1338 nt4.8□□□□□ -1.64
LSM6Q06406 NTE1YML059C 5040 nt4.8□□□□□ -1.64
LSM6Q06406 PET18YCR020C 648 nt4.8□□□□□ -1.64
LSM6Q06406 CBR1YIL043C 855 nt4.8□□□□□ -1.64
LSM6Q06406 YIL077CYIL077C 963 nt4.8□□□□□ -1.64
LSM6Q06406 VPS5YOR069W 2028 nt4.8□□□□□ -1.64
LSM6Q06406 YEL020CYEL020C 1683 nt4.8□□□□□ -1.64
LSM6Q06406 FET4YMR319C 1659 nt4.8□□□□□ -1.64
LSM6Q06406 THI2YBR240C 1353 nt4.79□□□□□ -1.64
LSM6Q06406 TGA1tA(UGC)A 73 nt4.79□□□□□ -1.64
LSM6Q06406 tA(UGC)EtA(UGC)E 73 nt4.79□□□□□ -1.64
LSM6Q06406 tA(UGC)GtA(UGC)G 73 nt4.79□□□□□ -1.64
LSM6Q06406 tA(UGC)LtA(UGC)L 73 nt4.79□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 11.9 ms